Brara.I03708.1


Description : Unknown function


Gene families : OG_42_0000525 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000525_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I03708.1
Cluster HCAA Clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
MA_159244g0020 No alias (p29022|chia_maize : 291.0) Endochitinase A precursor... 0.03 Orthogroups_2024-Update
PSME_00050467-RA No alias (at2g43590 : 220.0) Chitinase family protein; FUNCTIONS... 0.03 Orthogroups_2024-Update
Sobic.006G132700.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA 16Dec
BP GO:0006032 chitin catabolic process IEA 16Dec
MF GO:0008061 chitin binding IEA 16Dec
BP GO:0016998 cell wall macromolecule catabolic process IEA 16Dec
Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 75 222
IPR000726 Glyco_hydro_19_cat 226 273
IPR001002 Chitin-bd_1 27 61
No external refs found!