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  5. Brara.I03737.1

Brara.I03737.1


Description : plasma membrane intrinsic protein *(PIP)


Gene families : OG_42_0000132 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I03737.1
Cluster HCAA Clusters: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
Brara.I05637.1 No alias plasma membrane intrinsic protein *(PIP) 0.03 Orthogroups_2024-Update
Glyma.12G172500 No alias plasma membrane intrinsic protein 2 0.03 Orthogroups_2024-Update
MA_93945g0010 No alias (q6k215|pip22_orysa : 293.0) Probable aquaporin PIP2.2... 0.02 Orthogroups_2024-Update
PSME_00005910-RA No alias (at2g16850 : 366.0) plasma membrane intrinsic protein... 0.02 Orthogroups_2024-Update
PSME_00005912-RA No alias (at2g16850 : 374.0) plasma membrane intrinsic protein... 0.03 Orthogroups_2024-Update
PSME_00005913-RA No alias (at2g16850 : 358.0) plasma membrane intrinsic protein... 0.03 Orthogroups_2024-Update
Potri.005G109300 No alias plasma membrane intrinsic protein 2;8 0.03 Orthogroups_2024-Update
Potri.006G098100 No alias plasma membrane intrinsic protein 1;4 0.03 Orthogroups_2024-Update
Potri.016G113300 No alias plasma membrane intrinsic protein 1;4 0.03 Orthogroups_2024-Update
Pp1s1_535V6 No alias plasma membrane aquaporin 0.03 Orthogroups_2024-Update
Seita.1G264900.1 No alias plasma membrane intrinsic protein *(PIP) 0.02 Orthogroups_2024-Update
Seita.9G219400.1 No alias plasma membrane intrinsic protein *(PIP) 0.02 Orthogroups_2024-Update
Sobic.002G125200.1 No alias plasma membrane intrinsic protein *(PIP) 0.03 Orthogroups_2024-Update
Sobic.002G125700.2 No alias plasma membrane intrinsic protein *(PIP) 0.04 Orthogroups_2024-Update
Sobic.006G150100.1 No alias plasma membrane intrinsic protein *(PIP) 0.04 Orthogroups_2024-Update
Sopen01g038500 No alias Major intrinsic protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
InterPro domains Description Start Stop
IPR000425 MIP 31 265
No external refs found!