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  5. Brara.I03751.1

Brara.I03751.1


Description : Unknown function


Gene families : OG_42_0000413 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000413_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I03751.1
Cluster HCAA Clusters: Cluster_400

Target Alias Description ECC score Gene Family Method Actions
At1g55030 No alias RNI-like superfamily protein [Source:TAIR;Acc:AT1G55030] 0.04 Orthogroups_2024-Update
At3g51530 No alias F-box/FBD/LRR-repeat protein At3g51530... 0.03 Orthogroups_2024-Update
At4g15060 No alias CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596),... 0.03 Orthogroups_2024-Update
At4g26340 No alias F-box/FBD/LRR-repeat protein At4g26340... 0.05 Orthogroups_2024-Update
At5g56800 No alias Emb [Source:UniProtKB/TrEMBL;Acc:Q9FJT3] 0.06 Orthogroups_2024-Update
Brara.D01518.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.D02649.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H00792.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Brara.I00515.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006566 FBD 304 349
IPR013101 Leu-rich_rpt_2 119 144
No external refs found!