1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.I03816.1

Brara.I03816.1


Description : Unknown function


Gene families : OG_42_0002153 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002153_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I03816.1
Cluster HCAA Clusters: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
Bradi2g23540 No alias Function unknown 0.02 Orthogroups_2024-Update
HORVU1Hr1G072890.7 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os05g38040 No alias expressed protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
MF GO:0017070 U6 snRNA binding IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
MF GO:0030623 U5 snRNA binding IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!