Brara.I03838.1


Description : FCP subclass-E phosphatase


Gene families : OG_42_0003849 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003849_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I03838.1
Cluster HCAA Clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G173542 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000976 transcription regulatory region sequence-specific DNA binding IEP Predicted GO
MF GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEP Predicted GO
MF GO:0001012 RNA polymerase II regulatory region DNA binding IEP Predicted GO
MF GO:0001067 regulatory region nucleic acid binding IEP Predicted GO
BP GO:0002376 immune system process IEP Predicted GO
MF GO:0004564 beta-fructofuranosidase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0006955 immune response IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:0032422 purine-rich negative regulatory element binding IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0044212 transcription regulatory region DNA binding IEP Predicted GO
BP GO:0045087 innate immune response IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004274 FCP1_dom 85 267
No external refs found!