At2g32290

Description : Beta-amylase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8L762]

Gene families : OG_42_0000277 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000277_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At2g32290
Cluster	HCCA clusters: Cluster_114

Target	Alias	Description	ECC score	Gene Family Method
A4A49_35845	No alias	beta-amylase 1, chloroplastic	0.04	Orthogroups_2024-Update
Brara.H00800.1	No alias	EC_3.2 glycosylase & beta amylase	0.03	Orthogroups_2024-Update
MA_124514g0010	No alias	(at3g23920 : 732.0) Encodes a chloroplast beta-amylase....	0.02	Orthogroups_2024-Update
PSME_00015609-RA	No alias	(at4g17090 : 667.0) Encodes a beta-amylase targeted to...	0.02	Orthogroups_2024-Update
PSME_00017705-RA	No alias	(at4g17090 : 655.0) Encodes a beta-amylase targeted to...	0.03	Orthogroups_2024-Update
PSME_00048762-RA	No alias	(at3g23920 : 741.0) Encodes a chloroplast beta-amylase....	0.03	Orthogroups_2024-Update
PSME_00049655-RA	No alias	(at3g23920 : 374.0) Encodes a chloroplast beta-amylase....	0.02	Orthogroups_2024-Update
PSME_00051058-RA	No alias	(at3g23920 : 412.0) Encodes a chloroplast beta-amylase....	0.02	Orthogroups_2024-Update
PSME_00053865-RA	No alias	(at3g23920 : 404.0) Encodes a chloroplast beta-amylase....	0.02	Orthogroups_2024-Update
PSME_00055756-RA	No alias	(at3g23920 : 272.0) Encodes a chloroplast beta-amylase....	0.03	Orthogroups_2024-Update
Pp1s9_318V6	No alias	beta-amylase	0.03	Orthogroups_2024-Update
Sobic.001G508800.1	No alias	EC_3.2 glycosylase & beta amylase	0.03	Orthogroups_2024-Update
Sobic.002G329500.1	No alias	EC_3.2 glycosylase & beta amylase	0.04	Orthogroups_2024-Update
Solyc01g094580	No alias	Beta-amylase (AHRD V3.3 *** K4AZJ9_SOLLC)	0.07	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEA	InterProScan predictions
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016160	amylase activity	None	Extended
MF	GO:0016161	beta-amylase activity	IEA	InterProScan predictions
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Predicted GO
MF	GO:0003857	3-hydroxyacyl-CoA dehydrogenase activity	IEP	Predicted GO
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Predicted GO
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Predicted GO
MF	GO:0004817	cysteine-tRNA ligase activity	IEP	Predicted GO
CC	GO:0005783	endoplasmic reticulum	IEP	Predicted GO
BP	GO:0006099	tricarboxylic acid cycle	IEP	Predicted GO
BP	GO:0006101	citrate metabolic process	IEP	Predicted GO
BP	GO:0006423	cysteinyl-tRNA aminoacylation	IEP	Predicted GO
BP	GO:0006457	protein folding	IEP	Predicted GO
BP	GO:0006835	dicarboxylic acid transport	IEP	Predicted GO
MF	GO:0008964	phosphoenolpyruvate carboxylase activity	IEP	Predicted GO
MF	GO:0010181	FMN binding	IEP	Predicted GO
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Predicted GO
BP	GO:0015740	C4-dicarboxylate transport	IEP	Predicted GO
BP	GO:0015743	malate transport	IEP	Predicted GO
BP	GO:0015977	carbon fixation	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Predicted GO
BP	GO:0016999	antibiotic metabolic process	IEP	Predicted GO
BP	GO:0019725	cellular homeostasis	IEP	Predicted GO
MF	GO:0031072	heat shock protein binding	IEP	Predicted GO
CC	GO:0032993	protein-DNA complex	IEP	Predicted GO
BP	GO:0042592	homeostatic process	IEP	Predicted GO
CC	GO:0044427	chromosomal part	IEP	Predicted GO
CC	GO:0044815	DNA packaging complex	IEP	Predicted GO
BP	GO:0045454	cell redox homeostasis	IEP	Predicted GO
MF	GO:0051082	unfolded protein binding	IEP	Predicted GO
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO
BP	GO:0065008	regulation of biological quality	IEP	Predicted GO
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001554	Glyco_hydro_14	81	498

External Links

No external refs found!

At2g32290

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation