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Description : component *(eS26) of small ribosomal-subunit (SSU) proteome
Gene families : OG_42_0002386 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002386_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.I03875.1 | |
| Cluster | HCAA Clusters: Cluster_10 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 77589 | No alias | Ribosomal protein S26e family protein | 0.09 | Orthogroups_2024-Update | |
| At3g56340 | No alias | 40S ribosomal protein S26... | 0.03 | Orthogroups_2024-Update | |
| Bradi1g04070 | No alias | Ribosomal protein S26e family protein | 0.08 | Orthogroups_2024-Update | |
| Bradi2g53590 | No alias | Ribosomal protein S26e family protein | 0.05 | Orthogroups_2024-Update | |
| Brara.D02473.1 | No alias | component *(eS26) of small ribosomal-subunit (SSU) proteome | 0.09 | Orthogroups_2024-Update | |
| Cre16.g682300 | No alias | Ribosomal protein S26e family protein | 0.08 | Orthogroups_2024-Update | |
| GRMZM5G827266 | No alias | Ribosomal protein S26e family protein | 0.07 | Orthogroups_2024-Update | |
| GRMZM5G899149 | No alias | Ribosomal protein S26e family protein | 0.1 | Orthogroups_2024-Update | |
| Glyma.02G239700 | No alias | Ribosomal protein S26e family protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.14G208600 | No alias | Ribosomal protein S26e family protein | 0.12 | Orthogroups_2024-Update | |
| HORVU5Hr1G111820.1 | No alias | component *(eS26) of small ribosomal-subunit (SSU) proteome | 0.09 | Orthogroups_2024-Update | |
| Kfl00199_0140 | kfl00199_0140_v1.1 | (at3g56340 : 92.0) Ribosomal protein S26e family... | 0.03 | Orthogroups_2024-Update | |
| LOC_Os01g60790 | No alias | 40S ribosomal protein S26, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| MA_74546g0010 | No alias | (p49216|rs26_orysa : 123.0) 40S ribosomal protein S26... | 0.08 | Orthogroups_2024-Update | |
| Mp2g06210.1 | No alias | component RPS26 of SSU proteome | 0.08 | Orthogroups_2024-Update | |
| PSME_00018418-RA | No alias | (at3g56340 : 121.0) Ribosomal protein S26e family... | 0.03 | Orthogroups_2024-Update | |
| Potri.019G057000 | No alias | Ribosomal protein S26e family protein | 0.07 | Orthogroups_2024-Update | |
| Pp1s169_19V6 | No alias | 40s ribosomal protein s26 | 0.03 | Orthogroups_2024-Update | |
| Pp1s270_77V6 | No alias | 40s ribosomal protein s26 | 0.1 | Orthogroups_2024-Update | |
| Pp1s375_10V6 | No alias | 40s ribosomal protein s26 | 0.1 | Orthogroups_2024-Update | |
| Seita.3G205000.1 | No alias | component *(eS26) of small ribosomal-subunit (SSU) proteome | 0.14 | Orthogroups_2024-Update | |
| Seita.9G038300.1 | No alias | component *(eS26) of small ribosomal-subunit (SSU) proteome | 0.13 | Orthogroups_2024-Update | |
| Sobic.001G039400.2 | No alias | component *(eS26) of small ribosomal-subunit (SSU) proteome | 0.1 | Orthogroups_2024-Update | |
| Sobic.009G173500.1 | No alias | component *(eS26) of small ribosomal-subunit (SSU) proteome | 0.19 | Orthogroups_2024-Update | |
| Solyc04g008810 | No alias | 40S ribosomal S26-like protein (AHRD V3.3 *** I3S2G2_MEDTR) | 0.13 | Orthogroups_2024-Update | |
| Solyc06g007470 | No alias | 40S ribosomal S26-like protein (AHRD V3.3 *** I3S2G2_MEDTR) | 0.09 | Orthogroups_2024-Update | |
| Sopen04g003990 | No alias | Ribosomal protein S26e | 0.15 | Orthogroups_2024-Update | |
| Sopen06g002380 | No alias | Ribosomal protein S26e | 0.13 | Orthogroups_2024-Update | |
| evm.model.contig_2478.1 | No alias | (at3g56340 : 94.4) Ribosomal protein S26e family... | 0.08 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | 16Dec |
| CC | GO:0005840 | ribosome | IEA | 16Dec |
| BP | GO:0006412 | translation | IEA | 16Dec |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
| MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
| MF | GO:0004743 | pyruvate kinase activity | IEP | Predicted GO |
| MF | GO:0005525 | GTP binding | IEP | Predicted GO |
| BP | GO:0006270 | DNA replication initiation | IEP | Predicted GO |
| BP | GO:0006414 | translational elongation | IEP | Predicted GO |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
| MF | GO:0030955 | potassium ion binding | IEP | Predicted GO |
| MF | GO:0031420 | alkali metal ion binding | IEP | Predicted GO |
| MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
| MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000892 | Ribosomal_S26e | 1 | 106 |
| No external refs found! |