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  5. Brara.I03897.1

Brara.I03897.1


Description : component *(SEC15) of Exocyst complex


Gene families : OG_42_0001958 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001958_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I03897.1
Cluster HCAA Clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
At4g02350 No alias Exocyst complex component SEC15B... 0.03 Orthogroups_2024-Update
HORVU2Hr1G106010.1 No alias component *(SEC15) of Exocyst complex 0.03 Orthogroups_2024-Update
HORVU4Hr1G074030.1 No alias component *(SEC15) of Exocyst complex 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
CC GO:0016593 Cdc73/Paf1 complex IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!