1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.I03971.1

Brara.I03971.1


Description : alkaline alpha-galactosidase *(SIP2)


Gene families : OG_42_0000676 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000676_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I03971.1
Cluster HCAA Clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
At5g20250 No alias Raffinose synthase family protein... 0.04 Orthogroups_2024-Update
Bradi1g48050 No alias Raffinose synthase family protein 0.04 Orthogroups_2024-Update
Bradi5g13570 No alias seed imbibition 2 0.03 Orthogroups_2024-Update
Cre16.g666334 No alias seed imbibition 2 0.02 Orthogroups_2024-Update
Glyma.14G010500 No alias seed imbibition 1 0.05 Orthogroups_2024-Update
HORVU3Hr1G020780.5 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os06g07600 No alias uncharacterized glycosyltransferase, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00005466-RA No alias (at5g20250 : 946.0) encodes a member of glycosyl... 0.03 Orthogroups_2024-Update
PSME_00026740-RA No alias (at5g20250 : 246.0) encodes a member of glycosyl... 0.02 Orthogroups_2024-Update
Seita.6G195300.1 No alias galactinol-sucrose galactosyltransferase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR008811 Glycosyl_hydrolases_36 7 748
No external refs found!