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  5. Brara.I03979.1

Brara.I03979.1


Description : subgroup ERF-IV/DREB2 transcription factor


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I03979.1
Cluster HCAA Clusters: Cluster_311

Target Alias Description ECC score Gene Family Method Actions
68470 No alias ethylene responsive element binding factor 1 0.02 Orthogroups_2024-Update
A4A49_08495 No alias ethylene-responsive transcription factor 3 0.03 Orthogroups_2024-Update
A4A49_21566 No alias ethylene-responsive transcription factor erf087 0.03 Orthogroups_2024-Update
A4A49_24642 No alias ethylene-responsive transcription factor rap2-11 0.02 Orthogroups_2024-Update
A4A49_28228 No alias ethylene-responsive transcription factor erf017 0.03 Orthogroups_2024-Update
A4A49_42088 No alias ethylene-responsive transcription factor 13 0.02 Orthogroups_2024-Update
A4A49_42290 No alias ethylene-responsive transcription factor rap2-4 0.02 Orthogroups_2024-Update
At2g31230 No alias Ethylene-responsive transcription factor 15... 0.04 Orthogroups_2024-Update
At2g40350 No alias Integrase-type DNA-binding superfamily protein... 0.03 Orthogroups_2024-Update
At4g17500 No alias Ethylene-responsive transcription factor 1A... 0.03 Orthogroups_2024-Update
Bradi1g72457 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g24110 No alias related to AP2 10 0.03 Orthogroups_2024-Update
Brara.A00041.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
Brara.A01788.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
Brara.B02236.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.03 Orthogroups_2024-Update
Brara.I05614.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G103085 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G216600 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os08g45110 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g39850 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_10430769g0010 No alias (at5g25810 : 105.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00051454-RA No alias (at1g19210 : 98.6) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
PSME_00051455-RA No alias (at5g21960 : 102.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
Pp1s14_196V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Pp1s259_94V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s296_32V6 No alias transcriptional factor 0.02 Orthogroups_2024-Update
Pp1s31_112V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Seita.1G270800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.4G060700.1 No alias subgroup ERF-II-DEAR transcription factor 0.03 Orthogroups_2024-Update
Seita.4G252600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.6G023700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.9G038700.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.03 Orthogroups_2024-Update
Seita.9G516500.1 No alias subgroup ERF-VII transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G473900.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G225700.1 No alias subgroup ERF-X transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G269100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G283201.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G295500.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G308900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G184800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G259000.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Sobic.007G077200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G156700.1 No alias subgroup ERF-X transcription factor 0.02 Orthogroups_2024-Update
Sobic.010G016500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g095500 No alias Sl Cytokinin Response Factor 5 0.03 Orthogroups_2024-Update
Solyc05g052050 No alias DNA-binding protein Pti4 0.03 Orthogroups_2024-Update
Solyc08g078190 No alias ethylene-responsive transcription factor 0.03 Orthogroups_2024-Update
Solyc10g050970 No alias Ethylene Response Factor D.4 0.03 Orthogroups_2024-Update
Solyc12g056980 No alias Ethylene-responsive element binding-factor (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen06g024810 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen10g004900 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004150 dihydroneopterin aldolase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 26 76
No external refs found!