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  5. Brara.I04084.1

Brara.I04084.1


Description : Unknown function


Gene families : OG_42_0000110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I04084.1
Cluster HCAA Clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
At1g45616 No alias Receptor-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9C637] 0.03 Orthogroups_2024-Update
Glyma.02G271200 No alias receptor like protein 27 0.03 Orthogroups_2024-Update
Glyma.07G155000 No alias receptor like protein 43 0.03 Orthogroups_2024-Update
Glyma.09G145600 No alias receptor like protein 7 0.03 Orthogroups_2024-Update
HORVU3Hr1G111100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os01g06730 No alias verticillium wilt disease resistance protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os04g28210 No alias verticillium wilt disease resistance protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_10426950g0010 No alias (at1g72180 : 128.0) Leucine-rich receptor-like protein... 0.02 Orthogroups_2024-Update
Potri.011G021332 No alias receptor like protein 7 0.03 Orthogroups_2024-Update
Potri.012G009566 No alias receptor like protein 34 0.03 Orthogroups_2024-Update
Seita.7G139100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.008G075700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g005870 No alias Leucine-rich repeat receptor-like protein kinase family... 0.02 Orthogroups_2024-Update
Solyc01g008390 No alias Leucine-rich repeat receptor-like protein kinase family... 0.02 Orthogroups_2024-Update
Solyc10g076500 No alias Leucine-rich-repeat receptor-like protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc12g009690 No alias LOW QUALITY:Leucine-rich repeat receptor-like protein... 0.02 Orthogroups_2024-Update
Solyc12g009740 No alias Leucine-rich repeat receptor-like protein kinase family... 0.02 Orthogroups_2024-Update
Solyc12g009780 No alias LOW QUALITY:Leucine-rich-repeat receptor-like protein... 0.04 Orthogroups_2024-Update
Solyc12g099950 No alias Leucine-rich repeat receptor-like protein kinase family... 0.03 Orthogroups_2024-Update
Solyc12g099980 No alias Leucine-rich repeat receptor-like protein kinase family... 0.02 Orthogroups_2024-Update
Sopen01g001750 No alias Leucine Rich Repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 25 68
IPR001611 Leu-rich_rpt 519 539
IPR001611 Leu-rich_rpt 288 308
IPR001611 Leu-rich_rpt 100 157
IPR001611 Leu-rich_rpt 412 469
IPR001611 Leu-rich_rpt 543 602
IPR001611 Leu-rich_rpt 735 794
No external refs found!