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  5. Brara.I04121.1

Brara.I04121.1


Description : FRS/FRF-type transcription factor


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I04121.1
Cluster HCAA Clusters: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
At1g52520 No alias Protein FAR1-RELATED SEQUENCE 6... 0.03 Orthogroups_2024-Update
GRMZM2G106653 No alias FAR1-related sequence 6 0.02 Orthogroups_2024-Update
Glyma.20G132100 No alias FRS (FAR1 Related Sequences) transcription factor family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 301 394
IPR007527 Znf_SWIM 591 617
IPR004330 FAR1_DNA_bnd_dom 98 183
No external refs found!