Brara.I04272.1

Description : HD-ZIP I/II-type transcription factor

Gene families : OG_42_0000105 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.I04272.1
Cluster	HCAA Clusters: Cluster_128

Target	Alias	Description	ECC score	Gene Family Method
A4A49_10256	No alias	homeobox-leucine zipper protein hat5	0.03	Orthogroups_2024-Update
At1g69780	No alias	Homeobox-leucine zipper protein ATHB-13...	0.03	Orthogroups_2024-Update
At2g22430	No alias	Homeobox-leucine zipper protein ATHB-6...	0.03	Orthogroups_2024-Update
At2g46680	No alias	Homeobox-leucine zipper protein ATHB-7...	0.12	Orthogroups_2024-Update
At4g40060	No alias	HB16 [Source:UniProtKB/TrEMBL;Acc:A0A178V0P3]	0.02	Orthogroups_2024-Update
At5g65310	No alias	Homeobox-leucine zipper protein ATHB-5...	0.04	Orthogroups_2024-Update
At5g66700	No alias	Homeobox-leucine zipper protein ATHB-53...	0.03	Orthogroups_2024-Update
Bradi1g71280	No alias	homeobox protein 21	0.05	Orthogroups_2024-Update
Bradi1g73190	No alias	Homeobox-leucine zipper protein family	0.02	Orthogroups_2024-Update
Brara.A03941.1	No alias	HD-ZIP I/II-type transcription factor	0.06	Orthogroups_2024-Update
Brara.B00590.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.E00830.1	No alias	regulatory protein *(LMI1) of floral meristem identity...	0.04	Orthogroups_2024-Update
Brara.E03658.1	No alias	HD-ZIP I/II-type transcription factor	0.04	Orthogroups_2024-Update
Brara.F02402.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I00890.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I04578.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.K01296.1	No alias	HD-ZIP I/II-type transcription factor	0.04	Orthogroups_2024-Update
Glyma.02G058900	No alias	homeobox protein 40	0.04	Orthogroups_2024-Update
Glyma.17G096700	No alias	homeobox 1	0.03	Orthogroups_2024-Update
HORVU2Hr1G092710.2	No alias	HD-ZIP I/II-type transcription factor	0.05	Orthogroups_2024-Update
HORVU6Hr1G072810.6	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
LOC_Os03g10210	No alias	homeobox domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os09g29460	No alias	homeobox associated leucine zipper, putative, expressed	0.04	Orthogroups_2024-Update
PSME_00004067-RA	No alias	(at3g01220 : 128.0) Encodes a homeodomain leucine zipper...	0.02	Orthogroups_2024-Update
PSME_00014389-RA	No alias	(at1g69780 : 146.0) Encodes a homeodomain leucine zipper...	0.03	Orthogroups_2024-Update
PSME_00028456-RA	No alias	(at1g69780 : 114.0) Encodes a homeodomain leucine zipper...	0.03	Orthogroups_2024-Update
PSME_00044412-RA	No alias	(at1g26960 : 130.0) Encodes a homeodomain leucine zipper...	0.03	Orthogroups_2024-Update
PSME_00045697-RA	No alias	(at2g22430 : 145.0) Encodes a homeodomain leucine zipper...	0.04	Orthogroups_2024-Update
Potri.005G126100	No alias	homeobox protein 21	0.03	Orthogroups_2024-Update
Potri.012G023700	No alias	homeobox 7	0.04	Orthogroups_2024-Update
Pp1s143_73V6	No alias	af402605_1homeodomain leucine zipper protein hdz2	0.03	Orthogroups_2024-Update
Pp1s154_145V6	No alias	af402605_1homeodomain leucine zipper protein hdz2	0.04	Orthogroups_2024-Update
Pp1s31_96V6	No alias	dna-binding protein	0.03	Orthogroups_2024-Update
Pp1s77_184V6	No alias	No description available	0.04	Orthogroups_2024-Update
Seita.1G253700.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Seita.2G284000.1	No alias	HD-ZIP I/II-type transcription factor	0.01	Orthogroups_2024-Update
Seita.9G258100.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Seita.9G503700.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Solyc03g082550	No alias	Homeobox leucine zipper (AHRD V3.3 - J7FWS7_ROSRU)	0.03	Orthogroups_2024-Update
Solyc03g113270	No alias	LEVAHOX1G L.esculentum homeobox	0.03	Orthogroups_2024-Update
Sopen03g032330	No alias	Homeobox domain	0.03	Orthogroups_2024-Update
Sopen04g001860	No alias	Homeobox associated leucine zipper	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	IEP	Predicted GO
MF	GO:0003824	catalytic activity	IEP	Predicted GO
MF	GO:0004476	mannose-6-phosphate isomerase activity	IEP	Predicted GO
MF	GO:0004497	monooxygenase activity	IEP	Predicted GO
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predicted GO
MF	GO:0004568	chitinase activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
BP	GO:0006022	aminoglycan metabolic process	IEP	Predicted GO
BP	GO:0006026	aminoglycan catabolic process	IEP	Predicted GO
BP	GO:0006030	chitin metabolic process	IEP	Predicted GO
BP	GO:0006032	chitin catabolic process	IEP	Predicted GO
BP	GO:0006040	amino sugar metabolic process	IEP	Predicted GO
MF	GO:0008061	chitin binding	IEP	Predicted GO
BP	GO:0009057	macromolecule catabolic process	IEP	Predicted GO
BP	GO:0009415	response to water	IEP	Predicted GO
BP	GO:0009628	response to abiotic stimulus	IEP	Predicted GO
MF	GO:0009916	alternative oxidase activity	IEP	Predicted GO
BP	GO:0010035	response to inorganic substance	IEP	Predicted GO
MF	GO:0010181	FMN binding	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	Predicted GO
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Predicted GO
MF	GO:0016853	isomerase activity	IEP	Predicted GO
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Predicted GO
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Predicted GO
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
BP	GO:0042737	drug catabolic process	IEP	Predicted GO
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Predicted GO
BP	GO:0046348	amino sugar catabolic process	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0046914	transition metal ion binding	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
MF	GO:0050662	coenzyme binding	IEP	Predicted GO
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Predicted GO
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	Predicted GO
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Predicted GO
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Predicted GO
BP	GO:1901700	response to oxygen-containing compound	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003106	Leu_zip_homeo	87	128
IPR001356	Homeobox_dom	33	85

External Links

No external refs found!

Brara.I04272.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation