Brara.I04360.1

Description : E3 ubiquitin ligase *(SP1) & E3 ubiquitin ligase *(SPL)

Gene families : OG_42_0004771 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004771_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.I04360.1
Cluster	HCAA Clusters: Cluster_340

Target	Alias	Description	ECC score	Gene Family Method	Actions
evm.model.tig00021326.42	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	16Dec
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	16Dec
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004045	aminoacyl-tRNA hydrolase activity	IEP	Predicted GO
BP	GO:0007030	Golgi organization	IEP	Predicted GO
CC	GO:0017053	transcriptional repressor complex	IEP	Predicted GO
CC	GO:0070176	DRM complex	IEP	Predicted GO
CC	GO:0090568	nuclear transcriptional repressor complex	IEP	Predicted GO
CC	GO:0090571	RNA polymerase II transcription repressor complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR022170	GIDE	91	189

External Links

No external refs found!

Brara.I04360.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation