Brara.I04443.1

Description : deubiquitinase

Gene families : OG_42_0000597 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000597_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.I04443.1
Cluster	HCAA Clusters: Cluster_176

Target	Alias	Description	ECC score	Gene Family Method
A4A49_19482	No alias	desi-like protein	0.03	Orthogroups_2024-Update
GRMZM2G073979	No alias	PPPDE putative thiol peptidase family protein	0.03	Orthogroups_2024-Update
Glyma.06G063800	No alias	PPPDE putative thiol peptidase family protein	0.02	Orthogroups_2024-Update
Glyma.07G025600	No alias	PPPDE putative thiol peptidase family protein	0.02	Orthogroups_2024-Update
Glyma.17G249300	No alias	PPPDE putative thiol peptidase family protein	0.03	Orthogroups_2024-Update
Sobic.010G064100.1	No alias	deubiquitinase	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0008233	peptidase activity	IEA	16Dec
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003697	single-stranded DNA binding	IEP	Predicted GO
BP	GO:0006813	potassium ion transport	IEP	Predicted GO
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Predicted GO
MF	GO:0030151	molybdenum ion binding	IEP	Predicted GO
MF	GO:0030234	enzyme regulator activity	IEP	Predicted GO
MF	GO:0098772	molecular function regulator	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR008580	PPPDE_dom	18	151

External Links

No external refs found!