1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.I04449.1

Brara.I04449.1


Description : clade I phosphatase


Gene families : OG_42_0000834 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000834_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I04449.1
Cluster HCAA Clusters: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
At2g25070 No alias Probable protein phosphatase 2C 21... 0.04 Orthogroups_2024-Update
Bradi3g43430 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
Glyma.08G220100 No alias Protein phosphatase 2C family protein 0.04 Orthogroups_2024-Update
Seita.1G063200.1 No alias clade I phosphatase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 23 103
IPR001932 PPM-type_phosphatase_dom 155 314
No external refs found!