- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : carotenoid cleavage dioxygenase *(CCD1) & EC_1.13 oxidoreductase acting on single donor with incorporation of molecular oxygen (oxygenase)
Gene families : OG_42_0000424 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000424_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.I04484.1 | |
| Cluster | HCAA Clusters: Cluster_211 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_24598 | No alias | 9-cis-epoxycarotenoid dioxygenase nced3, chloroplastic | 0.02 | Orthogroups_2024-Update | |
| Brara.A03189.1 | No alias | EC_1.13 oxidoreductase acting on single donor with... | 0.03 | Orthogroups_2024-Update | |
| Brara.E02677.1 | No alias | EC_1.13 oxidoreductase acting on single donor with... | 0.03 | Orthogroups_2024-Update | |
| Brara.I04483.1 | No alias | carotenoid cleavage dioxygenase *(CCD1) & EC_1.13... | 0.08 | Orthogroups_2024-Update | |
| Glyma.15G250100 | No alias | nine-cis-epoxycarotenoid dioxygenase 3 | 0.02 | Orthogroups_2024-Update | |
| HORVU6Hr1G068720.4 | No alias | carotenoid cleavage dioxygenase *(CCD4) & EC_1.13... | 0.03 | Orthogroups_2024-Update | |
| LOC_Os02g47510 | No alias | 9-cis-epoxycarotenoid dioxygenase 1, chloroplast... | 0.02 | Orthogroups_2024-Update | |
| MA_10425950g0010 | No alias | (at4g19170 : 581.0) chloroplast-targeted member of a... | 0.03 | Orthogroups_2024-Update | |
| MA_10434448g0010 | No alias | (at3g14440 : 592.0) Encodes ... | 0.05 | Orthogroups_2024-Update | |
| Mp7g12990.1 | No alias | carotenoid cleavage dioxygenase (CCD1) | 0.02 | Orthogroups_2024-Update | |
| PSME_00053495-RA | No alias | (at3g14440 : 677.0) Encodes ... | 0.04 | Orthogroups_2024-Update | |
| Potri.011G112400 | No alias | nine-cis-epoxycarotenoid dioxygenase 3 | 0.02 | Orthogroups_2024-Update | |
| Pp1s118_231V6 | No alias | MAA21.150; 9-cis-epoxycarotenoid dioxygenase /... | 0.02 | Orthogroups_2024-Update | |
| Pp1s132_26V6 | No alias | carotenoid cleavage dioxygenase | 0.02 | Orthogroups_2024-Update | |
| Solyc07g056570 | No alias | notabilis | 0.04 | Orthogroups_2024-Update | |
| Sopen07g029920 | No alias | Retinal pigment epithelial membrane protein | 0.02 | Orthogroups_2024-Update | |
| Sopen08g024140 | No alias | Retinal pigment epithelial membrane protein | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEA | 16Dec |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Predicted GO |
| CC | GO:0000808 | origin recognition complex | IEP | Predicted GO |
| MF | GO:0004096 | catalase activity | IEP | Predicted GO |
| MF | GO:0004645 | phosphorylase activity | IEP | Predicted GO |
| MF | GO:0004857 | enzyme inhibitor activity | IEP | Predicted GO |
| CC | GO:0005664 | nuclear origin of replication recognition complex | IEP | Predicted GO |
| BP | GO:0006811 | ion transport | IEP | Predicted GO |
| BP | GO:0007165 | signal transduction | IEP | Predicted GO |
| MF | GO:0008171 | O-methyltransferase activity | IEP | Predicted GO |
| MF | GO:0008184 | glycogen phosphorylase activity | IEP | Predicted GO |
| BP | GO:0035556 | intracellular signal transduction | IEP | Predicted GO |
| CC | GO:0044454 | nuclear chromosome part | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004294 | Carotenoid_Oase | 119 | 596 |
| No external refs found! |