Brara.I04578.1

Description : HD-ZIP I/II-type transcription factor

Gene families : OG_42_0000105 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.I04578.1
Cluster	HCAA Clusters: Cluster_140

Target	Alias	Description	ECC score	Gene Family Method
A4A49_10256	No alias	homeobox-leucine zipper protein hat5	0.03	Orthogroups_2024-Update
A4A49_36238	No alias	homeobox-leucine zipper protein hat5	0.04	Orthogroups_2024-Update
A4A49_39997	No alias	homeobox-leucine zipper protein athb-13	0.03	Orthogroups_2024-Update
At2g22430	No alias	Homeobox-leucine zipper protein ATHB-6...	0.03	Orthogroups_2024-Update
At2g46680	No alias	Homeobox-leucine zipper protein ATHB-7...	0.03	Orthogroups_2024-Update
Bradi4g29380	No alias	homeobox 1	0.03	Orthogroups_2024-Update
Brara.B01411.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.C00651.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.D02811.1	No alias	HD-ZIP I/II-type transcription factor	0.05	Orthogroups_2024-Update
Brara.E03658.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I04272.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Glyma.05G030000	No alias	homeobox 1	0.03	Orthogroups_2024-Update
Glyma.13G064000	No alias	homeobox 3	0.03	Orthogroups_2024-Update
HORVU4Hr1G075170.1	No alias	HD-ZIP I/II-type transcription factor	0.02	Orthogroups_2024-Update
HORVU6Hr1G072810.6	No alias	HD-ZIP I/II-type transcription factor	0.06	Orthogroups_2024-Update
LOC_Os03g10210	No alias	homeobox domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os09g35910	No alias	homeobox associated leucine zipper, putative, expressed	0.02	Orthogroups_2024-Update
MA_128g0010	No alias	(at1g69780 : 137.0) Encodes a homeodomain leucine zipper...	0.05	Orthogroups_2024-Update
MA_130615g0020	No alias	(at2g22430 : 152.0) Encodes a homeodomain leucine zipper...	0.04	Orthogroups_2024-Update
MA_169305g0010	No alias	(at2g22430 : 149.0) Encodes a homeodomain leucine zipper...	0.05	Orthogroups_2024-Update
MA_19453g0040	No alias	(at3g01470 : 183.0) Encodes a homeodomain leucine zipper...	0.03	Orthogroups_2024-Update
PSME_00000008-RA	No alias	(at1g69780 : 103.0) Encodes a homeodomain leucine zipper...	0.02	Orthogroups_2024-Update
PSME_00014389-RA	No alias	(at1g69780 : 146.0) Encodes a homeodomain leucine zipper...	0.05	Orthogroups_2024-Update
PSME_00017541-RA	No alias	(at2g22430 : 139.0) Encodes a homeodomain leucine zipper...	0.03	Orthogroups_2024-Update
PSME_00032088-RA	No alias	(at1g69780 : 147.0) Encodes a homeodomain leucine zipper...	0.02	Orthogroups_2024-Update
PSME_00033843-RA	No alias	(at3g01470 : 181.0) Encodes a homeodomain leucine zipper...	0.02	Orthogroups_2024-Update
PSME_00044412-RA	No alias	(at1g26960 : 130.0) Encodes a homeodomain leucine zipper...	0.02	Orthogroups_2024-Update
PSME_00045697-RA	No alias	(at2g22430 : 145.0) Encodes a homeodomain leucine zipper...	0.02	Orthogroups_2024-Update
Potri.001G083700	No alias	homeobox 7	0.02	Orthogroups_2024-Update
Pp1s154_145V6	No alias	af402605_1homeodomain leucine zipper protein hdz2	0.02	Orthogroups_2024-Update
Pp1s31_96V6	No alias	dna-binding protein	0.02	Orthogroups_2024-Update
Pp1s325_51V6	No alias	af402605_1homeodomain leucine zipper protein hdz2	0.02	Orthogroups_2024-Update
Pp1s34_317V6	No alias	homeobox-leucine zipper protein hat7	0.01	Orthogroups_2024-Update
Pp1s431_27V6	No alias	af402605_1homeodomain leucine zipper protein hdz2	0.03	Orthogroups_2024-Update
Pp1s77_184V6	No alias	No description available	0.03	Orthogroups_2024-Update
Seita.1G253700.1	No alias	HD-ZIP I/II-type transcription factor	0.02	Orthogroups_2024-Update
Seita.1G306100.1	No alias	HD-ZIP I/II-type transcription factor	0.02	Orthogroups_2024-Update
Seita.6G187700.1	No alias	HD-ZIP I/II-type transcription factor	0.02	Orthogroups_2024-Update
Seita.7G184600.1	No alias	HD-ZIP I/II-type transcription factor	0.04	Orthogroups_2024-Update
Solyc01g096320	No alias	Homeobox-leucine zipper protein (AHRD V3.3 *** M4W1Z7_TOBAC)	0.03	Orthogroups_2024-Update
Solyc03g082550	No alias	Homeobox leucine zipper (AHRD V3.3 - J7FWS7_ROSRU)	0.02	Orthogroups_2024-Update
Solyc05g006980	No alias	Homeobox leucine zipper family protein (AHRD V3.3 ***...	0.04	Orthogroups_2024-Update
Sopen01g040080	No alias	Homeobox domain	0.03	Orthogroups_2024-Update
Sopen02g031700	No alias	Homeobox domain	0.02	Orthogroups_2024-Update
Sopen02g032560	No alias	Homeobox domain	0.03	Orthogroups_2024-Update
Sopen03g022310	No alias	Homeobox domain	0.02	Orthogroups_2024-Update
Sopen06g018290	No alias	Homeobox domain	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Predicted GO
MF	GO:0004096	catalase activity	IEP	Predicted GO
MF	GO:0004177	aminopeptidase activity	IEP	Predicted GO
MF	GO:0004347	glucose-6-phosphate isomerase activity	IEP	Predicted GO
MF	GO:0004497	monooxygenase activity	IEP	Predicted GO
MF	GO:0004601	peroxidase activity	IEP	Predicted GO
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Predicted GO
MF	GO:0004612	phosphoenolpyruvate carboxykinase (ATP) activity	IEP	Predicted GO
MF	GO:0004664	prephenate dehydratase activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
BP	GO:0005975	carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0005996	monosaccharide metabolic process	IEP	Predicted GO
BP	GO:0006006	glucose metabolic process	IEP	Predicted GO
BP	GO:0006094	gluconeogenesis	IEP	Predicted GO
BP	GO:0006558	L-phenylalanine metabolic process	IEP	Predicted GO
MF	GO:0008235	metalloexopeptidase activity	IEP	Predicted GO
MF	GO:0008236	serine-type peptidase activity	IEP	Predicted GO
MF	GO:0008238	exopeptidase activity	IEP	Predicted GO
BP	GO:0009094	L-phenylalanine biosynthetic process	IEP	Predicted GO
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	IEP	Predicted GO
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Predicted GO
MF	GO:0016209	antioxidant activity	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Predicted GO
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0016829	lyase activity	IEP	Predicted GO
MF	GO:0016830	carbon-carbon lyase activity	IEP	Predicted GO
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Predicted GO
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Predicted GO
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Predicted GO
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Predicted GO
MF	GO:0017171	serine hydrolase activity	IEP	Predicted GO
BP	GO:0019318	hexose metabolic process	IEP	Predicted GO
BP	GO:0019319	hexose biosynthetic process	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
MF	GO:0043167	ion binding	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
BP	GO:0044238	primary metabolic process	IEP	Predicted GO
BP	GO:0044283	small molecule biosynthetic process	IEP	Predicted GO
BP	GO:0046364	monosaccharide biosynthetic process	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	IEP	Predicted GO
MF	GO:0051287	NAD binding	IEP	Predicted GO
MF	GO:0070006	metalloaminopeptidase activity	IEP	Predicted GO
BP	GO:0071704	organic substance metabolic process	IEP	Predicted GO
BP	GO:1902221	erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process	IEP	Predicted GO
BP	GO:1902223	erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003106	Leu_zip_homeo	117	158
IPR001356	Homeobox_dom	62	115

External Links

No external refs found!

Brara.I04578.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation