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  5. Brara.I04721.1

Brara.I04721.1


Description : component *(eS30) of small ribosomal-subunit (SSU) proteome


Gene families : OG_42_0002853 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002853_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I04721.1
Cluster HCAA Clusters: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
227173 No alias Ribosomal protein S30 family protein 0.05 Orthogroups_2024-Update
At2g19750 No alias 40S ribosomal protein S30... 0.04 Orthogroups_2024-Update
At4g29390 No alias 40S ribosomal protein S30... 0.03 Orthogroups_2024-Update
Brara.A00791.1 No alias component *(eS30) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Cre16.g666301 No alias Ribosomal protein S30 family protein 0.09 Orthogroups_2024-Update
GRMZM2G054012 No alias Ribosomal protein S30 family protein 0.05 Orthogroups_2024-Update
LOC_Os06g07580 No alias expressed protein 0.03 Orthogroups_2024-Update
PSME_00048165-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Potri.012G086600 No alias Ribosomal protein S30 family protein 0.04 Orthogroups_2024-Update
Potri.014G147200 No alias Ribosomal protein S30 family protein 0.05 Orthogroups_2024-Update
Potri.015G084700 No alias Ribosomal protein S30 family protein 0.04 Orthogroups_2024-Update
Pp1s22_155V6 No alias 40s ribosomal protein s30 0.06 Orthogroups_2024-Update
Pp1s22_171V6 No alias 40s ribosomal protein s30 0.06 Orthogroups_2024-Update
Pp1s283_53V6 No alias 40s ribosomal protein s30 0.07 Orthogroups_2024-Update
Pp1s97_259V6 No alias 40s ribosomal protein s30 0.05 Orthogroups_2024-Update
Solyc08g076340 No alias 40S ribosomal protein S30 (AHRD V3.3 *** W9QWZ6_9ROSA) 0.05 Orthogroups_2024-Update
Solyc12g008700 No alias peroxisomal ABC transporter 1 (AHRD V3.3 --* AT4G39850.4) 0.11 Orthogroups_2024-Update
evm.model.tig00001003.33 No alias no hits & (original description: no original description) 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006846 Ribosomal_S30 3 59
No external refs found!