Brara.I04723.1

Description : component *(eL31) of large ribosomal-subunit (LSU) proteome

Gene families : OG_42_0001913 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001913_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.I04723.1
Cluster	HCAA Clusters: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
268515	No alias	Ribosomal protein L31e family protein	0.06	Orthogroups_2024-Update
A4A49_04515	No alias	60s ribosomal protein l31	0.03	Orthogroups_2024-Update
Bradi3g39870	No alias	Ribosomal protein L31e family protein	0.06	Orthogroups_2024-Update
Bradi3g53460	No alias	Ribosomal protein L31e family protein	0.05	Orthogroups_2024-Update
Brara.B01256.1	No alias	component *(eL31) of large ribosomal-subunit (LSU) proteome	0.08	Orthogroups_2024-Update
Brara.J01097.1	No alias	component *(eL31) of large ribosomal-subunit (LSU) proteome	0.05	Orthogroups_2024-Update
Cre12.g489153	No alias	Ribosomal protein L31e family protein	0.05	Orthogroups_2024-Update
GRMZM2G074085	No alias	Ribosomal protein L31e family protein	0.06	Orthogroups_2024-Update
Glyma.01G004300	No alias	Ribosomal protein L31e family protein	0.08	Orthogroups_2024-Update
Glyma.07G127500	No alias	Ribosomal protein L31e family protein	0.1	Orthogroups_2024-Update
Glyma.08G030900	No alias	Ribosomal protein L31e family protein	0.06	Orthogroups_2024-Update
HORVU6Hr1G070670.1	No alias	component *(eL31) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
HORVU7Hr1G050170.1	No alias	component *(eL31) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
Kfl00006_0140	kfl00006_0140_v1.1	(at2g19740 : 154.0) Ribosomal protein L31e family...	0.02	Orthogroups_2024-Update
Mp7g18320.1	No alias	component RPL31 of LSU proteome component	0.04	Orthogroups_2024-Update
Potri.001G269600	No alias	Ribosomal protein L31e family protein	0.04	Orthogroups_2024-Update
Potri.009G064100	No alias	Ribosomal protein L31e family protein	0.04	Orthogroups_2024-Update
Pp1s28_306V6	No alias	60s ribosomal protein l31a	0.04	Orthogroups_2024-Update
Pp1s30_365V6	No alias	60s ribosomal protein l31a	0.07	Orthogroups_2024-Update
Pp1s50_89V6	No alias	60s ribosomal protein l31a	0.07	Orthogroups_2024-Update
Pp1s58_106V6	No alias	60s ribosomal protein l31a	0.06	Orthogroups_2024-Update
Pp1s79_255V6	No alias	60s ribosomal protein l31a	0.05	Orthogroups_2024-Update
Seita.1G297300.1	No alias	component *(eL31) of large ribosomal-subunit (LSU) proteome	0.07	Orthogroups_2024-Update
Seita.6G204000.1	No alias	component *(eL31) of large ribosomal-subunit (LSU) proteome	0.07	Orthogroups_2024-Update
Sobic.004G259700.1	No alias	component *(eL31) of large ribosomal-subunit (LSU) proteome	0.08	Orthogroups_2024-Update
Sobic.007G211700.1	No alias	component *(eL31) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Solyc12g008720	No alias	60S ribosomal protein L31 (AHRD V3.3 *** W9QLF2_9ROSA)	0.09	Orthogroups_2024-Update
Sopen12g003650	No alias	Ribosomal protein L31e	0.08	Orthogroups_2024-Update
evm.model.contig_477.12	No alias	(q9mav7\|rl31_pangi : 120.0) 60S ribosomal protein L31 -...	0.08	Orthogroups_2024-Update
evm.model.tig00020703.20	No alias	(q9mav7\|rl31_pangi : 155.0) 60S ribosomal protein L31 -...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	16Dec
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	16Dec
BP	GO:0006412	translation	IEA	16Dec
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003746	translation elongation factor activity	IEP	Predicted GO
MF	GO:0004425	indole-3-glycerol-phosphate synthase activity	IEP	Predicted GO
MF	GO:0004809	tRNA (guanine-N2-)-methyltransferase activity	IEP	Predicted GO
BP	GO:0006396	RNA processing	IEP	Predicted GO
BP	GO:0006399	tRNA metabolic process	IEP	Predicted GO
BP	GO:0006414	translational elongation	IEP	Predicted GO
BP	GO:0006643	membrane lipid metabolic process	IEP	Predicted GO
BP	GO:0006665	sphingolipid metabolic process	IEP	Predicted GO
BP	GO:0006672	ceramide metabolic process	IEP	Predicted GO
BP	GO:0008033	tRNA processing	IEP	Predicted GO
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predicted GO
MF	GO:0008173	RNA methyltransferase activity	IEP	Predicted GO
MF	GO:0008175	tRNA methyltransferase activity	IEP	Predicted GO
BP	GO:0010206	photosystem II repair	IEP	Predicted GO
BP	GO:0010207	photosystem II assembly	IEP	Predicted GO
MF	GO:0016423	tRNA (guanine) methyltransferase activity	IEP	Predicted GO
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Predicted GO
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Predicted GO
MF	GO:0016831	carboxy-lyase activity	IEP	Predicted GO
BP	GO:0022607	cellular component assembly	IEP	Predicted GO
BP	GO:0030091	protein repair	IEP	Predicted GO
MF	GO:0031267	small GTPase binding	IEP	Predicted GO
BP	GO:0034470	ncRNA processing	IEP	Predicted GO
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Predicted GO
BP	GO:0034660	ncRNA metabolic process	IEP	Predicted GO
BP	GO:0043933	protein-containing complex subunit organization	IEP	Predicted GO
BP	GO:0065003	protein-containing complex assembly	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000054	Ribosomal_L31e	10	91

External Links

No external refs found!

Brara.I04723.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation