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  5. Brara.I04808.1

Brara.I04808.1


Description : subunit beta of NAC ribosome-associated chaperone complex


Gene families : OG_42_0001746 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001746_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I04808.1
Cluster HCAA Clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
A4A49_20316 No alias nascent polypeptide-associated complex subunit beta 0.03 Orthogroups_2024-Update
Bradi1g01600 No alias basic transcription factor 3 0.05 Orthogroups_2024-Update
Brara.F01258.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.03 Orthogroups_2024-Update
Brara.G02326.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.05 Orthogroups_2024-Update
Brara.G03282.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.05 Orthogroups_2024-Update
Brara.H02448.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.1 Orthogroups_2024-Update
Glyma.11G113901 No alias basic transcription factor 3 0.06 Orthogroups_2024-Update
Glyma.12G039900 No alias basic transcription factor 3 0.05 Orthogroups_2024-Update
HORVU1Hr1G042270.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.03 Orthogroups_2024-Update
HORVU5Hr1G122170.4 No alias subunit beta of NAC ribosome-associated chaperone complex 0.08 Orthogroups_2024-Update
MA_10436879g0010 No alias (at1g17880 : 175.0) basic transcription factor 3 (BTF3);... 0.04 Orthogroups_2024-Update
MA_798143g0020 No alias (at1g73230 : 172.0) Nascent polypeptide-associated... 0.04 Orthogroups_2024-Update
Potri.012G037900 No alias basic transcription factor 3 0.05 Orthogroups_2024-Update
Potri.015G029800 No alias basic transcription factor 3 0.04 Orthogroups_2024-Update
Potri.017G141100 No alias basic transcription factor 3 0.03 Orthogroups_2024-Update
Pp1s213_68V6 No alias transcription factor btf3 0.13 Orthogroups_2024-Update
Pp1s479_10V6 No alias T18K17.10; nascent polypeptide-associated complex (NAC)... 0.06 Orthogroups_2024-Update
Seita.9G009500.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.04 Orthogroups_2024-Update
Sobic.001G011200.1 No alias subunit beta of NAC ribosome-associated chaperone complex 0.08 Orthogroups_2024-Update
Sopen07g004640 No alias NAC domain 0.03 Orthogroups_2024-Update
Sopen09g005060 No alias NAC domain 0.04 Orthogroups_2024-Update
evm.model.contig_3542.8 No alias (at1g17880 : 98.2) basic transcription factor 3 (BTF3);... 0.11 Orthogroups_2024-Update
evm.model.tig00021181.13 No alias (at1g73230 : 162.0) Nascent polypeptide-associated... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001181 RNA polymerase I general transcription initiation factor activity IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006361 transcription initiation from RNA polymerase I promoter IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0030688 preribosome, small subunit precursor IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
MF GO:0140223 general transcription initiation factor activity IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002715 Nas_poly-pep-assoc_cplx_dom 36 91
No external refs found!