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  5. Brara.I04814.1

Brara.I04814.1


Description : B-G-class Rab-GDF protein


Gene families : OG_42_0000375 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000375_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I04814.1
Cluster HCAA Clusters: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
At3g13710 No alias PRA1 family protein F4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIC7] 0.05 Orthogroups_2024-Update
At5g56230 No alias PRA1 family protein G2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH16] 0.04 Orthogroups_2024-Update
Bradi2g53810 No alias prenylated RAB acceptor 1.B4 0.02 Orthogroups_2024-Update
Brara.C00019.1 No alias B-G-class Rab-GDF protein 0.03 Orthogroups_2024-Update
Brara.E00691.1 No alias B-G-class Rab-GDF protein 0.03 Orthogroups_2024-Update
Brara.F00022.1 No alias B-G-class Rab-GDF protein 0.03 Orthogroups_2024-Update
Solyc06g050570 No alias PRA1 family protein (AHRD V3.3 *** K4C5K1_SOLLC) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 34 172
No external refs found!