1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.I04980.1

Brara.I04980.1


Description : transcription factor *(CLAUSA)


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I04980.1
Cluster HCAA Clusters: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
A4A49_37728 No alias protein phosphate starvation response 1 0.03 Orthogroups_2024-Update
HORVU1Hr1G068930.39 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Pp1s33_139V6 No alias myb family transcription factor 0.03 Orthogroups_2024-Update
Seita.1G283000.1 No alias KANADI-type transcription factor 0.02 Orthogroups_2024-Update
Seita.7G223500.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002682 regulation of immune system process IEP Predicted GO
BP GO:0002831 regulation of response to biotic stimulus IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004181 metallocarboxypeptidase activity IEP Predicted GO
MF GO:0008235 metalloexopeptidase activity IEP Predicted GO
BP GO:0010112 regulation of systemic acquired resistance IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
BP GO:0031347 regulation of defense response IEP Predicted GO
BP GO:0032101 regulation of response to external stimulus IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0043900 regulation of multi-organism process IEP Predicted GO
BP GO:0045088 regulation of innate immune response IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0050776 regulation of immune response IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 25 76
No external refs found!