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  5. Brara.I04981.1

Brara.I04981.1


Description : C2H2 subclass IDD transcription factor


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I04981.1
Cluster HCAA Clusters: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
93509 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
A4A49_34121 No alias protein indeterminate-domain 11 0.03 Orthogroups_2024-Update
Bradi3g51090 No alias indeterminate(ID)-domain 4 0.02 Orthogroups_2024-Update
Bradi5g18530 No alias indeterminate(ID)-domain 4 0.04 Orthogroups_2024-Update
GRMZM2G027333 No alias indeterminate(ID)-domain 11 0.02 Orthogroups_2024-Update
GRMZM2G179677 No alias indeterminate(ID)-domain 2 0.03 Orthogroups_2024-Update
LOC_Os09g38340 No alias ZOS9-17 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
MA_10436688g0010 No alias (at1g68130 : 189.0) indeterminate(ID)-domain 14 (IDD14);... 0.02 Orthogroups_2024-Update
Mp1g15660.1 No alias C2H2 zinc finger transcription factor 0.02 Orthogroups_2024-Update
Potri.005G125600 No alias C2H2-like zinc finger protein 0.02 Orthogroups_2024-Update
Pp1s63_51V6 No alias nucleic acid binding 0.02 Orthogroups_2024-Update
Seita.1G268600.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Seita.6G247000.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Solyc01g099340 No alias Zinc finger protein (AHRD V3.3 *** E9NZV2_PHAVU) 0.04 Orthogroups_2024-Update
Solyc02g062940 No alias Zinc finger protein (AHRD V3.3 *-* K9P0T0_9ROSI) 0.02 Orthogroups_2024-Update
Sopen01g042900 No alias Zinc finger, C2H2 type 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006787 porphyrin-containing compound catabolic process IEP Predicted GO
BP GO:0006865 amino acid transport IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015996 chlorophyll catabolic process IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
BP GO:0033015 tetrapyrrole catabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
BP GO:0046149 pigment catabolic process IEP Predicted GO
MF GO:0047746 chlorophyllase activity IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 82 103
No external refs found!