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  5. Brara.I05067.1

Brara.I05067.1


Description : transcriptional co-repressor *(AFP/NINJA)


Gene families : OG_42_0000789 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000789_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I05067.1
Cluster HCAA Clusters: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
Seita.2G381600.1 No alias transcriptional co-repressor *(AFP/NINJA) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016151 nickel cation binding IEP Predicted GO
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0016972 thiol oxidase activity IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR012463 Ninja_motif 44 78
IPR032310 NINJA_B 102 187
IPR032308 Jas 268 302
No external refs found!