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  5. Brara.I05093.1

Brara.I05093.1


Description : substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)


Gene families : OG_42_0000339 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I05093.1
Cluster HCAA Clusters: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Bradi3g58320 No alias RNI-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G427529 No alias RNI-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.03G209400 No alias F-box/RNI-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.04G093500 No alias auxin F-box protein 5 0.03 Orthogroups_2024-Update
Glyma.07G189800 No alias F-box/RNI-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G059500 No alias F-box/RNI-like superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os02g52230 No alias coronatine-insensitive protein 1, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g15880 No alias coronatine-insensitive protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_47869g0020 No alias (at4g24390 : 219.0) RNI-like superfamily protein; BEST... 0.03 Orthogroups_2024-Update
MA_78902g0010 No alias (at5g49980 : 364.0) auxin F-box protein 5 (AFB5);... 0.03 Orthogroups_2024-Update
Mp2g26590.1 No alias component COI of jasmonic acid receptor complex 0.04 Orthogroups_2024-Update
Pp1s12_347V6 No alias coronitine insensitive 1 0.02 Orthogroups_2024-Update
Pp1s277_20V6 No alias TLP2A TIR1-like auxin receptor protein 0.03 Orthogroups_2024-Update
Pp1s44_198V6 No alias afb2 gene for auxin signalling f-box protein AFB2 0.02 Orthogroups_2024-Update
Seita.5G385200.1 No alias component *(COI) of jasmonic acid receptor complex 0.03 Orthogroups_2024-Update
Seita.8G132300.1 No alias substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) 0.03 Orthogroups_2024-Update
Solyc05g052620 No alias Coronatine-insensitive 1 0.03 Orthogroups_2024-Update
Sopen02g023990 No alias Leucine Rich repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
CC GO:0005778 peroxisomal membrane IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010038 response to metal ion IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
CC GO:0031082 BLOC complex IEP Predicted GO
CC GO:0031083 BLOC-1 complex IEP Predicted GO
CC GO:0031903 microbody membrane IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
CC GO:0044445 cytosolic part IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 149 165
No external refs found!