1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.I05209.1

Brara.I05209.1


Description : EC_3.1 hydrolase acting on ester bond & pectin methylesterase


Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I05209.1
Cluster HCAA Clusters: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
A4A49_38545 No alias pectinesterase 2 0.04 Orthogroups_2024-Update
A4A49_40779 No alias putative pectinesterasepectinesterase inhibitor 34 0.03 Orthogroups_2024-Update
Bradi2g11860 No alias pectin methylesterase 3 0.03 Orthogroups_2024-Update
Brara.D02731.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.04 Orthogroups_2024-Update
Glyma.02G008400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.07G046033 No alias pectin methylesterase 3 0.03 Orthogroups_2024-Update
Glyma.15G184400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.20G237800 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
LOC_Os01g13320 No alias pectinesterase, putative, expressed 0.03 Orthogroups_2024-Update
MA_177599g0010 No alias (at5g53370 : 494.0) pectin methylesterase PCR fragment F... 0.03 Orthogroups_2024-Update
PSME_00038370-RA No alias (o04887|pme2_citsi : 476.0) Pectinesterase-2 precursor... 0.02 Orthogroups_2024-Update
Potri.002G202500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Potri.015G013700 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Sobic.003G005400.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.04 Orthogroups_2024-Update
Solyc02g080210 No alias Pectinesterase (AHRD V3.3 *** K4B9P2_SOLLC) 0.03 Orthogroups_2024-Update
Solyc02g080220 No alias Pectinesterase (AHRD V3.3 *** K4B9P3_SOLLC) 0.05 Orthogroups_2024-Update
Solyc03g083360 No alias Pectinesterase (AHRD V3.3 *** K4BIB2_SOLLC) 0.03 Orthogroups_2024-Update
Solyc03g123630 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Solyc07g064170 No alias pectin esterase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA 16Dec
MF GO:0030599 pectinesterase activity IEA 16Dec
BP GO:0042545 cell wall modification IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003883 CTP synthase activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005384 manganese ion transmembrane transporter activity IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0030026 cellular manganese ion homeostasis IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055071 manganese ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 55 200
IPR000070 Pectinesterase_cat 245 541
No external refs found!