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  5. Brara.I05218.1

Brara.I05218.1


Description : Unknown function


Gene families : OG_42_0000128 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I05218.1
Cluster HCAA Clusters: Cluster_399

Target Alias Description ECC score Gene Family Method Actions
115497 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
425963 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
427552 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
437924 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
A4A49_19258 No alias indole-3-acetic acid-amido synthetase gh3.6 0.02 Orthogroups_2024-Update
A4A49_29559 No alias indole-3-acetic acid-amido synthetase gh3.6 0.04 Orthogroups_2024-Update
A4A49_37324 No alias indole-3-acetic acid-amido synthetase gh3.6 0.04 Orthogroups_2024-Update
At1g48690 No alias At1g48690 [Source:UniProtKB/TrEMBL;Acc:Q9C737] 0.04 Orthogroups_2024-Update
At2g14960 No alias Probable indole-3-acetic acid-amido synthetase GH3.1... 0.02 Orthogroups_2024-Update
At5g13320 No alias Auxin-responsive GH3 family protein [Source:TAIR;Acc:AT5G13320] 0.04 Orthogroups_2024-Update
At5g13350 No alias Auxin-responsive GH3 family protein... 0.03 Orthogroups_2024-Update
At5g13360 No alias Auxin-responsive GH3 family protein... 0.03 Orthogroups_2024-Update
At5g13380 No alias Auxin-responsive GH3 family protein... 0.05 Orthogroups_2024-Update
At5g51470 No alias Auxin-responsive GH3 family protein... 0.03 Orthogroups_2024-Update
Bradi1g22830 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
Brara.B01373.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.04 Orthogroups_2024-Update
Brara.E01559.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.G00820.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.02 Orthogroups_2024-Update
Brara.I05219.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.K00646.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Glyma.02G154600 No alias putative indole-3-acetic acid-amido synthetase GH3.9 0.03 Orthogroups_2024-Update
Glyma.16G026900 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
Glyma.U031110 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
Glyma.U031207 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
MA_16777g0010 No alias (at1g28130 : 670.0) encodes an IAA-amido synthase that... 0.03 Orthogroups_2024-Update
PSME_00030829-RA No alias (at5g54510 : 861.0) Encodes an IAA-amido synthase that... 0.02 Orthogroups_2024-Update
Potri.002G206400 No alias putative indole-3-acetic acid-amido synthetase GH3.9 0.04 Orthogroups_2024-Update
Potri.011G129700 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
Potri.019G103500 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
Pp1s323_82V6 No alias putative auxin-responsive GH3 protein [Oryza sativa... 0.02 Orthogroups_2024-Update
Seita.2G375300.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.03 Orthogroups_2024-Update
Seita.5G018300.1 No alias jasmonoyl-amino acid synthetase *(JAR1) 0.02 Orthogroups_2024-Update
Seita.7G314200.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.03 Orthogroups_2024-Update
Seita.9G215200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc05g050290 No alias LOW QUALITY:Auxin-responsive GH3 family protein (AHRD... 0.02 Orthogroups_2024-Update
Solyc10g009600 No alias Auxin-responsive GH3 family protein (AHRD V3.3 *** AT2G46370.4) 0.03 Orthogroups_2024-Update
Solyc10g009610 No alias Auxin-responsive GH3 family protein (AHRD V3.3 *** AT2G46370.4) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004993 GH3 10 550
No external refs found!