1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.I05224.1

Brara.I05224.1


Description : catalytic component *(PP2A-phosphatase) of TTP preprophase band formation complex & catalytic component C of PP2A phosphatase complexes & EC_3.1 hydrolase acting on ester bond


Gene families : OG_42_0000383 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I05224.1
Cluster HCAA Clusters: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
Brara.D00235.1 No alias catalytic component *(PP2A-phosphatase) of TTP... 0.03 Orthogroups_2024-Update
Cre03.g199983 No alias protein phosphatase 2A-2 0.02 Orthogroups_2024-Update
LOC_Os09g11230 No alias Ser/Thr protein phosphatase family protein, putative, expressed 0.02 Orthogroups_2024-Update
Seita.1G032500.1 No alias catalytic component C of PP2A phosphatase complexes &... 0.06 Orthogroups_2024-Update
Solyc07g065020 No alias Serine/threonine-protein phosphatase (AHRD V3.3 *** K4CHI1_SOLLC) 0.03 Orthogroups_2024-Update
evm.model.tig00020563.177 No alias "(at3g19980 : 448.0) Encodes catalytic subunit of... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
InterPro domains Description Start Stop
IPR004843 Calcineurin-like_PHP_ApaH 48 239
No external refs found!