Brara.I05233.1

Description : transcriptional repressor *(NF-X1)

Gene families : OG_42_0001857 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001857_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.I05233.1
Cluster	HCAA Clusters: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method	Actions
GRMZM2G307823	No alias	NF-X-like 1	0.02	Orthogroups_2024-Update
Seita.5G112600.1	No alias	transcriptional repressor *(NF-X1)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	16Dec
MF	GO:0008270	zinc ion binding	IEA	16Dec
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000967	Znf_NFX1	364	381
IPR000967	Znf_NFX1	247	262
IPR000967	Znf_NFX1	503	526
IPR000967	Znf_NFX1	619	634
IPR000967	Znf_NFX1	423	440
IPR000967	Znf_NFX1	566	583
IPR000967	Znf_NFX1	300	318
IPR000967	Znf_NFX1	652	678
IPR000967	Znf_NFX1	479	489

External Links

No external refs found!