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  5. Brara.I05260.1

Brara.I05260.1


Description : component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling complex


Gene families : OG_42_0003077 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003077_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.I05260.1
Cluster HCAA Clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Bradi1g37490 No alias Translation elongation factor EF1B, gamma chain 0.2 Orthogroups_2024-Update
GRMZM2G320497 No alias Translation elongation factor EF1B, gamma chain 0.04 Orthogroups_2024-Update
HORVU7Hr1G087050.1 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling complex 0.13 Orthogroups_2024-Update
LOC_Os06g37440 No alias elongation factor 1-gamma, putative, expressed 0.05 Orthogroups_2024-Update
Mp7g04100.1 No alias component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex 0.09 Orthogroups_2024-Update
Potri.003G004700 No alias Translation elongation factor EF1B, gamma chain 0.07 Orthogroups_2024-Update
Pp1s132_188V6 No alias elongation factor 1-gamma 3 0.02 Orthogroups_2024-Update
Seita.4G234900.1 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling complex 0.16 Orthogroups_2024-Update
Seita.4G235000.1 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling complex 0.22 Orthogroups_2024-Update
Sobic.004G094200.1 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling complex 0.3 Orthogroups_2024-Update
Sobic.010G173100.1 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling complex 0.04 Orthogroups_2024-Update
Solyc06g011280 No alias Elongation factor 1-gamma 1 (AHRD V3.3 *** EF1G1_ORYSJ) 0.24 Orthogroups_2024-Update
Sopen06g005470 No alias Elongation factor 1 gamma, conserved domain 0.21 Orthogroups_2024-Update
evm.model.tig00000829.21 No alias (at1g09640 : 241.0) Translation elongation factor EF1B,... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEA 16Dec
BP GO:0006414 translational elongation IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0003937 IMP cyclohydrolase activity IEP Predicted GO
MF GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity IEP Predicted GO
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006164 purine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006188 IMP biosynthetic process IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019238 cyclohydrolase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046040 IMP metabolic process IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0072522 purine-containing compound biosynthetic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004046 GST_C 130 197
IPR001662 EF1B_G_C 252 359
IPR004045 Glutathione_S-Trfase_N 5 76
No external refs found!