Brara.I05292.1

Description : DNA replication auxiliary factor *(JHS1/DNA2)

Gene families : OG_42_0006253 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006253_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.I05292.1
Cluster	HCAA Clusters: Cluster_373

Target	Alias	Description	ECC score	Gene Family Method	Actions
Glyma.06G310500	No alias	DNA replication helicase, putative	0.03	Orthogroups_2024-Update
PSME_00011586-RA	No alias	(at1g08840 : 840.0) embryo defective 2411 (emb2411);...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	IEA	16Dec
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to ER	IEP	Predicted GO
BP	GO:0007010	cytoskeleton organization	IEP	Predicted GO
BP	GO:0009892	negative regulation of metabolic process	IEP	Predicted GO
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	Predicted GO
BP	GO:0010629	negative regulation of gene expression	IEP	Predicted GO
BP	GO:0016458	gene silencing	IEP	Predicted GO
BP	GO:0031047	gene silencing by RNA	IEP	Predicted GO
CC	GO:0043190	ATP-binding cassette (ABC) transporter complex	IEP	Predicted GO
CC	GO:0044459	plasma membrane part	IEP	Predicted GO
BP	GO:0048193	Golgi vesicle transport	IEP	Predicted GO
CC	GO:0098533	ATPase dependent transmembrane transport complex	IEP	Predicted GO
CC	GO:0098797	plasma membrane protein complex	IEP	Predicted GO
CC	GO:1902495	transmembrane transporter complex	IEP	Predicted GO
CC	GO:1904949	ATPase complex	IEP	Predicted GO
CC	GO:1990351	transporter complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR022765	Dna2/Cas4_DUF83	553	665
IPR014808	DNA_replication_fac_Dna2_N	346	548

External Links

No external refs found!