1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.I05306.1

Brara.I05306.1


Description : transcription factor *(YABBY)


Gene families : OG_42_0000538 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000538_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I05306.1
Cluster HCAA Clusters: Cluster_312

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G008925 No alias Function unknown 0.03 Orthogroups_2024-Update
GRMZM2G102218 No alias Plant-specific transcription factor YABBY family protein 0.03 Orthogroups_2024-Update
Glyma.03G029800 No alias Plant-specific transcription factor YABBY family protein 0.04 Orthogroups_2024-Update
Glyma.05G056000 No alias Plant-specific transcription factor YABBY family protein 0.03 Orthogroups_2024-Update
Glyma.13G157800 No alias plant-specific transcription factor YABBY family protein 0.03 Orthogroups_2024-Update
LOC_Os04g45330 No alias YABBY domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g06620 No alias YABBY domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.006G067800 No alias plant-specific transcription factor YABBY family protein 0.03 Orthogroups_2024-Update
Sobic.008G176300.1 No alias transcription factor *(YABBY) 0.03 Orthogroups_2024-Update
Solyc12g009580 No alias CRABS CLAW 5b 0.02 Orthogroups_2024-Update
Sopen07g004060 No alias YABBY protein 0.03 Orthogroups_2024-Update
Sopen12g004560 No alias YABBY protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006417 regulation of translation IEP Predicted GO
BP GO:0006448 regulation of translational elongation IEP Predicted GO
BP GO:0006449 regulation of translational termination IEP Predicted GO
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
BP GO:0009891 positive regulation of biosynthetic process IEP Predicted GO
BP GO:0009893 positive regulation of metabolic process IEP Predicted GO
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010608 posttranscriptional regulation of gene expression IEP Predicted GO
BP GO:0010628 positive regulation of gene expression IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
BP GO:0031325 positive regulation of cellular metabolic process IEP Predicted GO
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0034248 regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
BP GO:0043243 positive regulation of protein complex disassembly IEP Predicted GO
BP GO:0043244 regulation of protein complex disassembly IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0045727 positive regulation of translation IEP Predicted GO
BP GO:0045901 positive regulation of translational elongation IEP Predicted GO
BP GO:0045905 positive regulation of translational termination IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0048522 positive regulation of cellular process IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051130 positive regulation of cellular component organization IEP Predicted GO
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051247 positive regulation of protein metabolic process IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR006780 YABBY 6 164
No external refs found!