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  5. Brara.I05395.1

Brara.I05395.1


Description : Unknown function


Gene families : OG_42_0000103 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000103_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I05395.1
Cluster HCAA Clusters: Cluster_306

Target Alias Description ECC score Gene Family Method Actions
Bradi5g19831 No alias Function unknown 0.03 Orthogroups_2024-Update
LOC_Os01g36250 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g44740 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Solyc03g095400 No alias No description available 0.03 Orthogroups_2024-Update
Solyc09g057570 No alias No description available 0.04 Orthogroups_2024-Update
Solyc12g006900 No alias No description available 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004332 Transposase_MuDR 113 176
IPR018289 MULE_transposase_dom 311 406
IPR007527 Znf_SWIM 561 591
No external refs found!