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  5. Brara.I05398.1

Brara.I05398.1


Description : component *(PsbP) of PS-II oxygen-evolving center


Gene families : OG_42_0003661 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003661_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I05398.1
Cluster HCAA Clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
A4A49_25930 No alias oxygen-evolving enhancer protein 2-1, chloroplastic 0.13 Orthogroups_2024-Update
A4A49_63454 No alias oxygen-evolving enhancer protein 2-2, chloroplastic 0.03 Orthogroups_2024-Update
At1g06680 No alias Oxygen-evolving enhancer protein 2-1, chloroplastic... 0.06 Orthogroups_2024-Update
Bradi1g58160 No alias photosystem II subunit P-1 0.06 Orthogroups_2024-Update
Cre12.g550850 No alias photosystem II subunit P-1 0.12 Orthogroups_2024-Update
Glyma.02G282500 No alias photosystem II subunit P-1 0.17 Orthogroups_2024-Update
Glyma.08G304200 No alias photosystem II subunit P-1 0.1 Orthogroups_2024-Update
Glyma.14G031800 No alias photosystem II subunit P-1 0.07 Orthogroups_2024-Update
Glyma.18G114900 No alias photosystem II subunit P-1 0.13 Orthogroups_2024-Update
HORVU2Hr1G060880.1 No alias component *(PsbP) of PS-II oxygen-evolving center 0.03 Orthogroups_2024-Update
Kfl00191_0030 kfl00191_0030_v1.1 (p12302|psbp_spiol : 266.0) Oxygen-evolving enhancer... 0.02 Orthogroups_2024-Update
Kfl00239_0120 kfl00239_0120_v1.1 (at1g06680 : 244.0) Encodes a 23 kD extrinsic protein... 0.09 Orthogroups_2024-Update
LOC_Os07g04840 No alias PsbP, putative, expressed 0.07 Orthogroups_2024-Update
MA_3005g0010 No alias (q9slq8|psbp_cucsa : 229.0) Oxygen-evolving enhancer... 0.06 Orthogroups_2024-Update
Mp5g20290.1 No alias component PsbP of PS-II oxygen-evolving center 0.1 Orthogroups_2024-Update
Pp1s11_39V6 No alias oxygen-evolving enhancer protein chloroplast 0.14 Orthogroups_2024-Update
Pp1s135_79V6 No alias oxygen-evolving enhancer protein chloroplast 0.15 Orthogroups_2024-Update
Pp1s63_71V6 No alias oxygen-evolving enhancer protein chloroplast 0.15 Orthogroups_2024-Update
Pp1s75_141V6 No alias oxygen-evolving enhancer protein chloroplast 0.21 Orthogroups_2024-Update
Seita.4G207000.1 No alias component *(PsbP) of PS-II oxygen-evolving center 0.12 Orthogroups_2024-Update
Sobic.002G030200.1 No alias component *(PsbP) of PS-II oxygen-evolving center 0.13 Orthogroups_2024-Update
Solyc07g044860 No alias psbXphotosystem II 23 kDa protein 0.09 Orthogroups_2024-Update
Sopen07g023420 No alias PsbP 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
CC GO:0009523 photosystem II IEA 16Dec
CC GO:0009654 photosystem II oxygen evolving complex IEA 16Dec
BP GO:0015979 photosynthesis IEA 16Dec
CC GO:0019898 extrinsic component of membrane IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR002683 PsbP 93 262
No external refs found!