1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.I05507.1

Brara.I05507.1


Description : class XI myosin microfilament-based motor protein


Gene families : OG_42_0000130 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000130_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.I05507.1
Cluster HCAA Clusters: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
A4A49_03597 No alias myosin-1 0.03 Orthogroups_2024-Update
A4A49_30732 No alias myosin-2 0.04 Orthogroups_2024-Update
At1g17580 No alias Myosin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q39160] 0.02 Orthogroups_2024-Update
Brara.A01707.1 No alias class VIII myosin microfilament-based motor protein 0.04 Orthogroups_2024-Update
Cre16.g658650 No alias Myosin family protein with Dil domain 0.03 Orthogroups_2024-Update
Glyma.09G282500 No alias myosin XI D 0.04 Orthogroups_2024-Update
Glyma.13G120800 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Orthogroups_2024-Update
LOC_Os01g40200 No alias XIK, putative, expressed 0.02 Orthogroups_2024-Update
Mp8g04010.1 No alias C3H zinc finger transcription factor. class XI myosin... 0.02 Orthogroups_2024-Update
PSME_00003157-RA No alias (at2g31900 : 1831.0) Encodes an novel myosin isoform.;... 0.04 Orthogroups_2024-Update
PSME_00022093-RA No alias (at1g17580 : 308.0) Encodes a member of the type XI... 0.03 Orthogroups_2024-Update
PSME_00028363-RA No alias (at5g20490 : 238.0) Encodes a member of the type XI... 0.05 Orthogroups_2024-Update
evm.model.tig00000241.22 No alias (at1g54560 : 360.0) member of Myosin-like proteins; XIE;... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEA 16Dec
MF GO:0005515 protein binding IEA 16Dec
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016459 myosin complex IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
CC GO:0034457 Mpp10 complex IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044452 nucleolar part IEP Predicted GO
BP GO:0045048 protein insertion into ER membrane IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Predicted GO
BP GO:0046855 inositol phosphate dephosphorylation IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0051205 protein insertion into membrane IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0071545 inositol phosphate catabolic process IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 737 755
IPR000048 IQ_motif_EF-hand-BS 759 775
IPR000048 IQ_motif_EF-hand-BS 785 803
IPR000048 IQ_motif_EF-hand-BS 832 852
IPR000048 IQ_motif_EF-hand-BS 855 875
IPR002710 Dilute_dom 1324 1425
IPR004009 Myosin_N 9 52
IPR001609 Myosin_head_motor_dom 64 720
No external refs found!