Brara.I05551.1

Description : scaffold component *(CUL1) of SCF E3 ubiquitin ligase complexes

Gene families : OG_42_0000877 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000877_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.I05551.1
Cluster	HCAA Clusters: Cluster_345

Target	Alias	Description	ECC score	Gene Family Method
HORVU1Hr1G020400.19	No alias	scaffold component *(CUL1) of SCF E3 ubiquitin ligase complexes	0.03	Orthogroups_2024-Update
Sobic.002G141600.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Solyc01g067120	No alias	Cullin 1, putative (AHRD V3.3 *** A0A061EP85_THECC)	0.04	Orthogroups_2024-Update
Sopen06g003490	No alias	Cullin family	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	16Dec
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
MF	GO:0031625	ubiquitin protein ligase binding	IEA	16Dec
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
MF	GO:0044389	ubiquitin-like protein ligase binding	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006413	translational initiation	IEP	Predicted GO
BP	GO:0006914	autophagy	IEP	Predicted GO
MF	GO:0016409	palmitoyltransferase activity	IEP	Predicted GO
BP	GO:0061919	process utilizing autophagic mechanism	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001373	Cullin_N	40	386
IPR019559	Cullin_neddylation_domain	374	411

External Links

No external refs found!