1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.J00012.1

Brara.J00012.1


Description : phospholipase-D *(PLD-beta/gamma) & EC_3.1 hydrolase acting on ester bond


Gene families : OG_42_0000199 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000199_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J00012.1
Cluster HCAA Clusters: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Brara.C02686.1 No alias phospholipase-D *(PLD-beta/gamma) & EC_3.1 hydrolase... 0.03 Orthogroups_2024-Update
GRMZM2G140811 No alias phospholipase D delta 0.03 Orthogroups_2024-Update
Glyma.08G126700 No alias phospholipase D delta 0.03 Orthogroups_2024-Update
MA_6712g0010 No alias (q41142|plda1_ricco : 949.0) Phospholipase D alpha 1... 0.02 Orthogroups_2024-Update
MA_947991g0010 No alias (q43007|plda1_orysa : 325.0) Phospholipase D alpha 1... 0.04 Orthogroups_2024-Update
Potri.003G032800 No alias phospholipase D alpha 1 0.03 Orthogroups_2024-Update
Potri.014G074700 No alias phospholipase D beta 1 0.03 Orthogroups_2024-Update
Pp1s19_310V6 No alias phospholipase d 0.02 Orthogroups_2024-Update
Pp1s58_143V6 No alias phospholipase d 0.02 Orthogroups_2024-Update
Seita.9G018000.1 No alias phospholipase-D *(PLD-delta) & EC_3.1 hydrolase acting... 0.03 Orthogroups_2024-Update
Solyc01g103910 No alias Phospholipase D (AHRD V3.3 *** M0ZZP4_SOLTU) 0.04 Orthogroups_2024-Update
Solyc08g066800 No alias phospholipase D 0.03 Orthogroups_2024-Update
Sopen04g035650 No alias Phospholipase D C terminal 0.06 Orthogroups_2024-Update
Sopen12g006530 No alias Phospholipase D C terminal 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004649 poly(ADP-ribose) glycohydrolase activity IEP Predicted GO
BP GO:0006282 regulation of DNA repair IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
BP GO:0080135 regulation of cellular response to stress IEP Predicted GO
BP GO:2001020 regulation of response to DNA damage stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR024632 PLipase_D_C 982 1052
IPR000008 C2_dom 259 374
IPR001736 PLipase_D/transphosphatidylase 575 609
IPR001736 PLipase_D/transphosphatidylase 909 935
No external refs found!