1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.J00192.1

Brara.J00192.1


Description : clade E phosphatase


Gene families : OG_42_0000218 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000218_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J00192.1
Cluster HCAA Clusters: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
At3g02750 No alias Protein phosphatase 2C family protein [Source:TAIR;Acc:AT3G02750] 0.03 Orthogroups_2024-Update
Bradi3g43360 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
Brara.F02771.1 No alias clade E phosphatase 0.03 Orthogroups_2024-Update
GRMZM2G136765 No alias Protein phosphatase 2C family protein 0.04 Orthogroups_2024-Update
Glyma.13G299300 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
Glyma.20G238100 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
PSME_00046566-RA No alias (at1g16220 : 493.0) Protein phosphatase 2C family... 0.03 Orthogroups_2024-Update
Potri.005G021900 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
Potri.006G105000 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
Solyc10g076320 No alias Protein phosphatase-2c, putative (AHRD V3.3 *** B9SL27_RICCO) 0.04 Orthogroups_2024-Update
Sopen01g043560 No alias Protein phosphatase 2C 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0010257 NADH dehydrogenase complex assembly IEP Predicted GO
BP GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0044030 regulation of DNA methylation IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 83 319
No external refs found!