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  5. Brara.J00222.1

Brara.J00222.1


Description : component *(VPS2/CHMP2) of ESCRT-III complex


Gene families : OG_42_0001019 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001019_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J00222.1
Cluster HCAA Clusters: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
Bradi3g28730 No alias vacuolar protein sorting-associated protein 2.3 0.02 Orthogroups_2024-Update
Bradi4g09340 No alias SNF7 family protein 0.03 Orthogroups_2024-Update
Cre04.g213450 No alias SNF7 family protein 0.01 Orthogroups_2024-Update
Glyma.19G166200 No alias vacuolar protein sorting-associated protein 2.3 0.03 Orthogroups_2024-Update
Kfl00147_0110 kfl00147_0110_v1.1 (at1g03950 : 185.0) vacuolar protein sorting-associated... 0.01 Orthogroups_2024-Update
Mp8g06820.1 No alias component VPS2/CHMP2 of ESCRT-III complex 0.02 Orthogroups_2024-Update
Potri.001G442500 No alias SNF7 family protein 0.02 Orthogroups_2024-Update
Seita.2G091300.1 No alias component *(VPS2/CHMP2) of ESCRT-III complex 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
CC GO:0005778 peroxisomal membrane IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
CC GO:0031903 microbody membrane IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR005024 Snf7_fam 16 185
No external refs found!