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  5. Brara.J00240.1

Brara.J00240.1


Description : transcriptional repressor *(IAA/AUX)


Gene families : OG_42_0000083 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J00240.1
Cluster HCAA Clusters: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
A4A49_02602 No alias auxin-responsive protein iaa14 0.03 Orthogroups_2024-Update
Bradi2g07770 No alias phytochrome-associated protein 2 0.03 Orthogroups_2024-Update
Glyma.08G036400 No alias phytochrome-associated protein 2 0.03 Orthogroups_2024-Update
Glyma.09G193000 No alias phytochrome-associated protein 2 0.03 Orthogroups_2024-Update
Glyma.15G012700 No alias AUX/IAA transcriptional regulator family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G086070.6 No alias transcriptional repressor *(IAA/AUX) 0.05 Orthogroups_2024-Update
LOC_Os05g09480 No alias OsIAA16 - Auxin-responsive Aux/IAA gene family member, expressed 0.03 Orthogroups_2024-Update
MA_18664g0010 No alias (at3g16500 : 144.0) phytochrome-associated protein 1... 0.03 Orthogroups_2024-Update
MA_38g0010 No alias (at5g65670 : 256.0) auxin (indole-3-acetic acid) induced... 0.03 Orthogroups_2024-Update
PSME_00032304-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Seita.1G028400.1 No alias transcriptional repressor *(IAA/AUX) 0.02 Orthogroups_2024-Update
Sobic.010G146400.1 No alias transcriptional repressor *(IAA/AUX) 0.02 Orthogroups_2024-Update
Solyc03g120380 No alias auxin-regulated IAA19 0.03 Orthogroups_2024-Update
Solyc06g008580 No alias auxin-regulated IAA22 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005384 manganese ion transmembrane transporter activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009617 response to bacterium IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0030026 cellular manganese ion homeostasis IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
BP GO:0042742 defense response to bacterium IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055071 manganese ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 23 215
No external refs found!