1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.J00378.1

Brara.J00378.1


Description : EC_2.4 glycosyltransferase & callose synthase


Gene families : OG_42_0000121 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J00378.1
Cluster HCAA Clusters: Cluster_310

Target Alias Description ECC score Gene Family Method Actions
Bradi1g51757 No alias glucan synthase-like 8 0.03 Orthogroups_2024-Update
HORVU7Hr1G029930.18 No alias EC_2.4 glycosyltransferase & callose synthase 0.03 Orthogroups_2024-Update
MA_10434444g0010 No alias (at5g13000 : 321.0) encodes a gene similar to callose... 0.02 Orthogroups_2024-Update
Mp2g04240.1 No alias callose synthase 0.02 Orthogroups_2024-Update
Mp4g17120.1 No alias callose synthase 0.02 Orthogroups_2024-Update
PSME_00005650-RA No alias (at5g13000 : 751.0) encodes a gene similar to callose... 0.03 Orthogroups_2024-Update
Pp1s67_70V6 No alias transferring glycosyl 0.04 Orthogroups_2024-Update
Sopen07g030200 No alias 1,3-beta-glucan synthase component 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEA 16Dec
MF GO:0003843 1,3-beta-D-glucan synthase activity IEA 16Dec
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
MF GO:0036442 proton-exporting ATPase activity IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR003440 Glyco_trans_48 1138 1758
IPR039431 Vta1/CALS_N 41 179
IPR026899 FKS1-like_dom1 317 428
No external refs found!