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  5. Brara.J00404.1

Brara.J00404.1


Description : RBR-Ariadne-class E3 ubiquitin ligase


Gene families : OG_42_0000347 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J00404.1
Cluster HCAA Clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
At2g31770 No alias Probable E3 ubiquitin-protein ligase ARI9... 0.05 Orthogroups_2024-Update
At3g27710 No alias Probable E3 ubiquitin-protein ligase ARI3... 0.04 Orthogroups_2024-Update
Bradi1g14391 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Brara.B03864.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os03g13100 No alias ariadne-1, putative, expressed 0.03 Orthogroups_2024-Update
Sobic.001G162900.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.005G208900.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002867 IBR_dom 192 253
No external refs found!