Brara.J00420.1

Description : subgroup ERF-IX transcription factor

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.J00420.1
Cluster	HCAA Clusters: Cluster_61

Target	Alias	Description	ECC score	Gene Family Method
A4A49_16759	No alias	ethylene-responsive transcription factor erf012	0.03	Orthogroups_2024-Update
AC206951.3_FG016	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
At1g25470	No alias	Ethylene-responsive transcription factor ERF116...	0.03	Orthogroups_2024-Update
At1g75490	No alias	Dehydration-responsive element-binding protein 2D...	0.05	Orthogroups_2024-Update
At3g23230	No alias	Ethylene-responsive transcription factor ERF098...	0.03	Orthogroups_2024-Update
At5g19790	No alias	Ethylene-responsive transcription factor RAP2-11...	0.03	Orthogroups_2024-Update
At5g51190	No alias	Ethylene-responsive transcription factor ERF105...	0.03	Orthogroups_2024-Update
At5g61890	No alias	Ethylene-responsive transcription factor ERF114...	0.04	Orthogroups_2024-Update
Bradi1g54450	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Bradi4g41616	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Brara.A02664.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.B03778.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Brara.C00832.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Brara.C01453.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.G03053.1	No alias	subgroup ERF-II transcription factor *(ERF19/20)	0.03	Orthogroups_2024-Update
Brara.H01375.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Brara.H01575.1	No alias	transcription factor *(CBF/DREB1) & subgroup ERF-III...	0.03	Orthogroups_2024-Update
Brara.I00528.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
Brara.I01985.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.J00058.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G053503	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
GRMZM2G084264	No alias	Integrase-type DNA-binding superfamily protein	0.06	Orthogroups_2024-Update
GRMZM2G103085	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
GRMZM2G111415	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
GRMZM2G137341	No alias	C-repeat/DRE binding factor 2	0.04	Orthogroups_2024-Update
GRMZM2G174917	No alias	DREB and EAR motif protein 3	0.03	Orthogroups_2024-Update
GRMZM2G380377	No alias	dehydration response element B1A	0.03	Orthogroups_2024-Update
GRMZM2G421033	No alias	DREB and EAR motif protein 3	0.04	Orthogroups_2024-Update
Glyma.01G231200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.03G017300	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Glyma.06G295300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.07G250100	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.11G199300	No alias	cytokinin response factor 4	0.02	Orthogroups_2024-Update
Glyma.15G095600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.19G253100	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Glyma.20G070100	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
HORVU2Hr1G093660.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
HORVU2Hr1G094780.2	No alias	Unknown function	0.02	Orthogroups_2024-Update
HORVU4Hr1G079630.1	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
HORVU6Hr1G050520.2	No alias	subgroup ERF-IV/DREB2 transcription factor	0.02	Orthogroups_2024-Update
LOC_Os04g46400	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os04g52090	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os05g25260	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os05g41780	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g03670	No alias	dehydration-responsive element-binding protein,...	0.03	Orthogroups_2024-Update
LOC_Os07g42510	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_6447416g0010	No alias	(at4g17500 : 134.0) Encodes a member of the ERF...	0.02	Orthogroups_2024-Update
MA_98464g0010	No alias	(at1g78080 : 107.0) Encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00005184-RA	No alias	(q40479\|erf2_tobac : 141.0) Ethylene-responsive...	0.03	Orthogroups_2024-Update
PSME_00005185-RA	No alias	(at4g17500 : 105.0) Encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00007285-RA	No alias	(at5g50080 : 84.0) encodes a member of the ERF (ethylene...	0.02	Orthogroups_2024-Update
PSME_00008897-RA	No alias	(at4g17500 : 88.2) Encodes a member of the ERF (ethylene...	0.04	Orthogroups_2024-Update
PSME_00037531-RA	No alias	(at5g61890 : 123.0) encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00037533-RA	No alias	(at5g61890 : 108.0) encodes a member of the ERF...	0.04	Orthogroups_2024-Update
PSME_00041851-RA	No alias	(at1g21910 : 102.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00050761-RA	No alias	(at1g15360 : 129.0) Encodes a member of the ERF...	0.03	Orthogroups_2024-Update
Potri.001G069300	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.001G154200	No alias	ethylene responsive element binding factor 5	0.03	Orthogroups_2024-Update
Potri.002G124000	No alias	related to AP2 1	0.03	Orthogroups_2024-Update
Potri.009G101900	No alias	redox responsive transcription factor 1	0.04	Orthogroups_2024-Update
Potri.010G006800	No alias	ethylene-responsive element binding protein	0.03	Orthogroups_2024-Update
Potri.011G061700	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Potri.012G108500	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.014G046700	No alias	ethylene-responsive element binding factor 13	0.03	Orthogroups_2024-Update
Potri.014G055700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.017G055400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.018G085700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.019G131300	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Pp1s15_186V6	No alias	transcriptional factor	0.02	Orthogroups_2024-Update
Pp1s160_12V6	No alias	ap2 domain transcription factor	0.04	Orthogroups_2024-Update
Pp1s199_50V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s233_111V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s259_94V6	No alias	ap2 erf domain-containing transcription factor	0.03	Orthogroups_2024-Update
Pp1s296_32V6	No alias	transcriptional factor	0.03	Orthogroups_2024-Update
Pp1s31_112V6	No alias	ap2 erf domain-containing transcription factor	0.03	Orthogroups_2024-Update
Pp1s60_148V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s67_144V6	No alias	ap2 domain transcription factor	0.03	Orthogroups_2024-Update
Seita.1G257300.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Seita.2G138400.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Seita.2G156200.1	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
Seita.3G139200.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Seita.4G060700.1	No alias	subgroup ERF-II-DEAR transcription factor	0.02	Orthogroups_2024-Update
Seita.5G348000.1	No alias	subgroup ERF-VIII transcription factor	0.04	Orthogroups_2024-Update
Seita.9G320700.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G002500.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G169400.2	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.03	Orthogroups_2024-Update
Sobic.001G296300.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G502300.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.002G139400.1	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
Sobic.003G297600.1	No alias	subgroup ERF-IX transcription factor	0.06	Orthogroups_2024-Update
Sobic.004G297100.1	No alias	subgroup ERF-IX transcription factor	0.05	Orthogroups_2024-Update
Sobic.005G103100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.006G168000.1	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
Sobic.006G210300.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Sobic.006G259000.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Sobic.007G077001.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.007G077100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.007G077200.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Sobic.007G077300.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.009G111200.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.009G184400.1	No alias	subgroup ERF-VIII transcription factor	0.04	Orthogroups_2024-Update
Solyc01g095500	No alias	Sl Cytokinin Response Factor 5	0.04	Orthogroups_2024-Update
Solyc05g013540	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Sopen03g041270	No alias	AP2 domain	0.04	Orthogroups_2024-Update
Sopen05g030590	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen06g018310	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0005669	transcription factor TFIID complex	IEP	Predicted GO
CC	GO:0005743	mitochondrial inner membrane	IEP	Predicted GO
BP	GO:0006839	mitochondrial transport	IEP	Predicted GO
BP	GO:0006848	pyruvate transport	IEP	Predicted GO
BP	GO:0006850	mitochondrial pyruvate transmembrane transport	IEP	Predicted GO
BP	GO:0015718	monocarboxylic acid transport	IEP	Predicted GO
BP	GO:0015849	organic acid transport	IEP	Predicted GO
CC	GO:0019866	organelle inner membrane	IEP	Predicted GO
CC	GO:0044798	nuclear transcription factor complex	IEP	Predicted GO
BP	GO:0046942	carboxylic acid transport	IEP	Predicted GO
CC	GO:0090575	RNA polymerase II transcription factor complex	IEP	Predicted GO
BP	GO:0098656	anion transmembrane transport	IEP	Predicted GO
BP	GO:1901475	pyruvate transmembrane transport	IEP	Predicted GO
BP	GO:1903825	organic acid transmembrane transport	IEP	Predicted GO
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	Predicted GO
BP	GO:1990542	mitochondrial transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	79	129

External Links

No external refs found!

Brara.J00420.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation