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  5. Brara.J00425.1

Brara.J00425.1


Description : transcriptional co-activator *(BET/GTE)


Gene families : OG_42_0000275 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000275_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J00425.1
Cluster HCAA Clusters: Cluster_276

Target Alias Description ECC score Gene Family Method Actions
Brara.B02908.1 No alias transcriptional co-activator *(BET/GTE) 0.03 Orthogroups_2024-Update
Brara.C04410.1 No alias transcriptional co-activator *(BET/GTE) 0.03 Orthogroups_2024-Update
MA_87057g0010 No alias (at1g06230 : 305.0) This gene is predicted to encode a... 0.03 Orthogroups_2024-Update
PSME_00021830-RA No alias (at5g63320 : 245.0) Encodes NPX1 (Nuclear Protein X1), a... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0004813 alanine-tRNA ligase activity IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
BP GO:0006419 alanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001487 Bromodomain 355 422
IPR027353 NET_dom 527 588
No external refs found!