Brara.J00514.1

Description : A-class RAB GTPase

Gene families : OG_42_0000131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.J00514.1
Cluster	HCAA Clusters: Cluster_312

Target	Alias	Description	ECC score	Gene Family Method
A4A49_29337	No alias	ras-related protein raba3	0.02	Orthogroups_2024-Update
At1g07410	No alias	RABA2b [Source:UniProtKB/TrEMBL;Acc:A0A178WHD5]	0.03	Orthogroups_2024-Update
At5g45750	No alias	RABA1c [Source:UniProtKB/TrEMBL;Acc:A0A178UDB2]	0.03	Orthogroups_2024-Update
Brara.F00618.1	No alias	A-class RAB GTPase	0.03	Orthogroups_2024-Update
Brara.I05410.1	No alias	A-class RAB GTPase	0.04	Orthogroups_2024-Update
GRMZM2G127648	No alias	RAB GTPase homolog A1B	0.03	Orthogroups_2024-Update
Glyma.14G064800	No alias	RAB GTPase homolog A2B	0.03	Orthogroups_2024-Update
HORVU5Hr1G114250.1	No alias	A-class RAB GTPase	0.03	Orthogroups_2024-Update
HORVU5Hr1G120210.4	No alias	A-class RAB GTPase	0.02	Orthogroups_2024-Update
MA_59492g0010	No alias	(at3g12160 : 302.0) Encodes RABA4D, a member of the...	0.03	Orthogroups_2024-Update
Potri.014G102200	No alias	RAB GTPase homolog A3	0.02	Orthogroups_2024-Update
Pp1s196_73V6	No alias	ras-related protein rab11d	0.02	Orthogroups_2024-Update
Solyc06g005810	No alias	Ras-related protein Rab11C (AHRD V3.3 *** RB11C_LOTJA)	0.04	Orthogroups_2024-Update
Sopen12g005850	No alias	Ras family	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	16Dec
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004144	diacylglycerol O-acyltransferase activity	IEP	Predicted GO
MF	GO:0005319	lipid transporter activity	IEP	Predicted GO
BP	GO:0006869	lipid transport	IEP	Predicted GO
MF	GO:0008374	O-acyltransferase activity	IEP	Predicted GO
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	Predicted GO
MF	GO:0032182	ubiquitin-like protein binding	IEP	Predicted GO
MF	GO:0043130	ubiquitin binding	IEP	Predicted GO
BP	GO:0061024	membrane organization	IEP	Predicted GO
BP	GO:0120009	intermembrane lipid transfer	IEP	Predicted GO
MF	GO:0120013	intermembrane lipid transfer activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	14	174

External Links

No external refs found!