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  5. Brara.J00516.1

Brara.J00516.1


Description : clade A phosphatase


Gene families : OG_42_0000303 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000303_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J00516.1
Cluster HCAA Clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
At3g11410 No alias Protein phosphatase 2C 37... 0.03 Orthogroups_2024-Update
Bradi2g41950 No alias homology to ABI2 0.03 Orthogroups_2024-Update
Cre03.g211073 No alias Protein phosphatase 2C family protein 0.02 Orthogroups_2024-Update
Potri.006G224600 No alias homology to ABI1 0.02 Orthogroups_2024-Update
Sobic.009G161800.1 No alias clade A phosphatase 0.04 Orthogroups_2024-Update
Sopen06g017980 No alias Protein phosphatase 2C 0.03 Orthogroups_2024-Update
Sopen12g031910 No alias Protein phosphatase 2C 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 108 348
No external refs found!