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  5. Brara.J00689.1

Brara.J00689.1


Description : regulatory protein *(LOTR) involved in Casparian strip formation


Gene families : OG_42_0000240 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000240_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J00689.1
Cluster HCAA Clusters: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
90379 No alias Protein of Unknown Function (DUF239) 0.03 Orthogroups_2024-Update
AC207392.3_FG001 No alias Protein of Unknown Function (DUF239) 0.02 Orthogroups_2024-Update
Bradi1g04720 No alias Protein of Unknown Function (DUF239) 0.02 Orthogroups_2024-Update
Glyma.02G037400 No alias Protein of Unknown Function (DUF239) 0.03 Orthogroups_2024-Update
Glyma.08G283600 No alias Protein of Unknown Function (DUF239) 0.02 Orthogroups_2024-Update
Glyma.10G168300 No alias Protein of Unknown Function (DUF239) 0.04 Orthogroups_2024-Update
LOC_Os01g07570 No alias carboxyl-terminal proteinase, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00036533-RA No alias (at5g18460 : 272.0) Protein of Unknown Function... 0.02 Orthogroups_2024-Update
PSME_00040714-RA No alias (at1g55360 : 617.0) Protein of Unknown Function... 0.04 Orthogroups_2024-Update
Potri.013G050900 No alias Protein of Unknown Function (DUF239) 0.04 Orthogroups_2024-Update
Pp1s55_224V6 No alias T24C20.110; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.8G136900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G072700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G217900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G162000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sopen01g001580 No alias Domain of unknown function (DUF239) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025521 Neprosin_propep 70 176
IPR004314 Neprosin 202 412
No external refs found!