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  5. Brara.J00757.1

Brara.J00757.1


Description : transcription factor *(CBF/DREB1) & subgroup ERF-III transcription factor


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J00757.1
Cluster HCAA Clusters: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
A4A49_13998 No alias ethylene-responsive transcription factor 4 0.02 Orthogroups_2024-Update
A4A49_20932 No alias ethylene-responsive transcription factor erf114 0.04 Orthogroups_2024-Update
At1g36060 No alias Ethylene-responsive transcription factor ERF055... 0.03 Orthogroups_2024-Update
At1g74930 No alias Ethylene-responsive transcription factor ERF018... 0.03 Orthogroups_2024-Update
At1g75490 No alias Dehydration-responsive element-binding protein 2D... 0.03 Orthogroups_2024-Update
At2g31230 No alias Ethylene-responsive transcription factor 15... 0.02 Orthogroups_2024-Update
At3g23220 No alias Ethylene-responsive transcription factor ERF095... 0.02 Orthogroups_2024-Update
At3g60490 No alias Ethylene-responsive transcription factor ERF035... 0.05 Orthogroups_2024-Update
At5g25810 No alias Tny [Source:UniProtKB/TrEMBL;Acc:A0A178URN2] 0.02 Orthogroups_2024-Update
At5g65130 No alias Integrase-type DNA-binding superfamily protein... 0.02 Orthogroups_2024-Update
Bradi3g08790 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g17610 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Bradi5g17640 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Brara.A01384.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.04 Orthogroups_2024-Update
Brara.B00253.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.G03123.1 No alias subgroup ERF-VII transcription factor & transcription... 0.03 Orthogroups_2024-Update
Brara.H00147.1 No alias subgroup ERF-VIII transcription factor 0.04 Orthogroups_2024-Update
Brara.H02645.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G057386 No alias ethylene responsive element binding factor 5 0.03 Orthogroups_2024-Update
GRMZM2G466044 No alias ethylene responsive element binding factor 1 0.03 Orthogroups_2024-Update
Glyma.05G049800 No alias Integrase-type DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
Glyma.08G202300 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.13G122600 No alias ethylene response factor 1 0.03 Orthogroups_2024-Update
HORVU1Hr1G055710.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
HORVU4Hr1G013410.1 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.03 Orthogroups_2024-Update
LOC_Os05g25260 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_13408g0010 No alias (at1g21910 : 95.9) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_4929994g0010 No alias (original description: no original description) 0.02 Orthogroups_2024-Update
MA_78784g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_97319g0010 No alias (at3g16280 : 127.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
Mp7g17020.1 No alias Dehydration-responsive element-binding protein 2C... 0.03 Orthogroups_2024-Update
PSME_00005184-RA No alias (q40479|erf2_tobac : 141.0) Ethylene-responsive... 0.03 Orthogroups_2024-Update
PSME_00005187-RA No alias (at4g17500 : 144.0) Encodes a member of the ERF... 0.04 Orthogroups_2024-Update
PSME_00051455-RA No alias (at5g21960 : 102.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00052064-RA No alias (at5g21960 : 132.0) encodes a member of the DREB... 0.04 Orthogroups_2024-Update
Potri.010G072600 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.017G055400 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Seita.1G027200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.1G055900.1 No alias subgroup ERF-VIII transcription factor 0.04 Orthogroups_2024-Update
Seita.2G269600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G280400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.4G039700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.4G060700.1 No alias subgroup ERF-II-DEAR transcription factor 0.05 Orthogroups_2024-Update
Seita.5G348000.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G156100.1 No alias subgroup ERF-I transcription factor 0.04 Orthogroups_2024-Update
Sobic.010G164800.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Solyc02g077360 No alias Ethylene Response Factor B.2 0.04 Orthogroups_2024-Update
Sopen12g022660 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 52 102
No external refs found!