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  5. Brara.J00758.1

Brara.J00758.1


Description : subgroup ERF-III transcription factor


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.J00758.1
Cluster HCAA Clusters: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
At1g28360 No alias Ethylene-responsive transcription factor 12... 0.03 Orthogroups_2024-Update
At1g44830 No alias Ethylene-responsive transcription factor ERF014... 0.05 Orthogroups_2024-Update
At2g33710 No alias Integrase-type DNA-binding superfamily protein... 0.03 Orthogroups_2024-Update
Bradi2g52370 No alias erf domain protein 9 0.03 Orthogroups_2024-Update
Glyma.01G232000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G163700 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.06G295300 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.13G060600 No alias related to AP2 11 0.03 Orthogroups_2024-Update
Glyma.13G122600 No alias ethylene response factor 1 0.03 Orthogroups_2024-Update
Glyma.17G210500 No alias Integrase-type DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
Glyma.20G172800 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G058270.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
LOC_Os05g27930 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g28440 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10343854g0010 No alias (at1g74930 : 110.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_18454g0020 No alias (q9sxs8|erf3_tobac : 96.3) Ethylene-responsive... 0.03 Orthogroups_2024-Update
MA_65190g0010 No alias (at5g19790 : 91.3) encodes a member of the ERF (ethylene... 0.02 Orthogroups_2024-Update
MA_8384767g0010 No alias (at1g33760 : 124.0) encodes a member of the DREB... 0.04 Orthogroups_2024-Update
MA_896002g0010 No alias (at5g11590 : 147.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
Mp4g22280.1 No alias no hits & (original description: none) 0.03 Orthogroups_2024-Update
PSME_00022946-RA No alias (at5g61890 : 105.0) encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00037533-RA No alias (at5g61890 : 108.0) encodes a member of the ERF... 0.05 Orthogroups_2024-Update
PSME_00052454-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.010G186400 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Pp1s162_92V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.5G406200.1 No alias subgroup ERF-II transcription factor *(ERF19/20) 0.03 Orthogroups_2024-Update
Sobic.003G324400.2 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Sobic.005G051200.2 No alias subgroup ERF-X transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 74 121
No external refs found!